RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
HMGN3-202ENST00000344726 ZHX1Q9UKY1 873 aaPredicted RBP16.95■□□□□ 0.3
HMGN3-202ENST00000344726 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
HMGN3-202ENST00000344726 SYNRGQ9UMZ2 1314 aa16.95■□□□□ 0.3
HMGN3-202ENST00000344726 BAZ2BQ9UIF8 2168 aaKnown RBP16.94■□□□□ 0.3
HMGN3-202ENST00000344726 MYADML2A6NDP7 307 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 GOLGA8HP0CJ92 632 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 CYB5R4Q7L1T6 521 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 PURBQ96QR8 312 aaKnown RBP16.94■□□□□ 0.3
HMGN3-202ENST00000344726 CPVLQ9H3G5 476 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 PHF24Q9UPV7 400 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 TNKSO95271 1327 aa16.94■□□□□ 0.3
HMGN3-202ENST00000344726 A0A1W2PPC1 479 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 ICAM1P05362 532 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 TKFCQ3LXA3 575 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 TRIM60Q495X7 471 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 LRCH3Q96II8 777 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 CNNM2Q9H8M5 875 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 ATP11BQ9Y2G3 1177 aa16.93■□□□□ 0.3
HMGN3-202ENST00000344726 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
HMGN3-202ENST00000344726 POTEB2H3BUK9 544 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 PTGS1P23219 599 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
HMGN3-202ENST00000344726 SEC23AQ15436 765 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 CCSAPQ6IQ19 270 aaPredicted RBP16.92■□□□□ 0.3
HMGN3-202ENST00000344726 STOX1Q6ZVD7 989 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 KAT14Q9H8E8 782 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 CYP39A1Q9NYL5 469 aa16.92■□□□□ 0.3
HMGN3-202ENST00000344726 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-202ENST00000344726 A0A1W2PQ45 241 aaPredicted RBP16.91■□□□□ 0.3
HMGN3-202ENST00000344726 A0A1W2PQY0 241 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 KLHDC9Q8NEP7 349 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 UBA5Q9GZZ9 404 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 ABHD16BQ9H3Z7 469 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
HMGN3-202ENST00000344726 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
HMGN3-202ENST00000344726 E7EWF7 191 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 NFIBO00712 420 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
HMGN3-202ENST00000344726 C1orf53Q5VUE5 145 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 SH3RF1Q7Z6J0 888 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 RNF180Q86T96 592 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 ESYT1Q9BSJ8 1104 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 LSG1Q9H089 658 aaKnown RBP16.9■□□□□ 0.3
HMGN3-202ENST00000344726 PDLIM7Q9NR12 457 aa16.9■□□□□ 0.3
HMGN3-202ENST00000344726 CTAGE5O15320 804 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 DUSP11O75319 330 aaKnown RBP16.89■□□□□ 0.29
HMGN3-202ENST00000344726 TMEM63BQ5T3F8 832 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
HMGN3-202ENST00000344726 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 TDHQ8IZJ6 230 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 UBE2OQ9C0C9 1292 aaKnown RBP16.89■□□□□ 0.29
HMGN3-202ENST00000344726 SENP2Q9HC62 589 aa16.89■□□□□ 0.29
HMGN3-202ENST00000344726 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 ITGB8P26012 769 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
HMGN3-202ENST00000344726 ACLYP53396 1101 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
HMGN3-202ENST00000344726 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
HMGN3-202ENST00000344726 SLC30A10Q6XR72 485 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 STAG2Q8N3U4 1231 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 TRIM43Q96BQ3 446 aaPredicted RBP16.88■□□□□ 0.29
HMGN3-202ENST00000344726 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
HMGN3-202ENST00000344726 PDGFCQ9NRA1 345 aa16.88■□□□□ 0.29
HMGN3-202ENST00000344726 GJA9P57773 515 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 ANTXR2P58335 489 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 TLE2Q04725 743 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 TRDNQ13061 729 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 KCNA10Q16322 511 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 ASPRV1Q53RT3 343 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 FBXO16Q8IX29 292 aaPredicted RBP16.87■□□□□ 0.29
HMGN3-202ENST00000344726 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 TSEN34Q9BSV6 310 aaKnown RBP16.87■□□□□ 0.29
HMGN3-202ENST00000344726 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
HMGN3-202ENST00000344726 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
HMGN3-202ENST00000344726 ASB14A6NK59 587 aa16.86■□□□□ 0.29
HMGN3-202ENST00000344726 PARP1P09874 1014 aaKnown RBP16.86■□□□□ 0.29
HMGN3-202ENST00000344726 C6orf222P0C671 652 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-202ENST00000344726 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-202ENST00000344726 USH1GQ495M9 461 aa16.86■□□□□ 0.29
HMGN3-202ENST00000344726 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-202ENST00000344726 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
HMGN3-202ENST00000344726 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
HMGN3-202ENST00000344726 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
HMGN3-202ENST00000344726 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms