RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
ATG4B-201ENST00000344376 NFIBO00712 420 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 CDC45O75419 566 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 LRRC26Q2I0M4 334 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 USH1GQ495M9 461 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 HABP4Q5JVS0 413 aaKnown RBP18.75■□□□□ 0.59
ATG4B-201ENST00000344376 STOX1Q6ZVD7 989 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 CPVLQ9H3G5 476 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 SPC25Q9HBM1 224 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 COLQQ9Y215 455 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-201ENST00000344376 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
ATG4B-201ENST00000344376 PGK1P00558 417 aa18.74■□□□□ 0.59
ATG4B-201ENST00000344376 ATN1P54259 1190 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-201ENST00000344376 BAATQ14032 418 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-201ENST00000344376 TMEM67Q5HYA8 995 aa18.74■□□□□ 0.59
ATG4B-201ENST00000344376 RNF207Q6ZRF8 634 aa18.74■□□□□ 0.59
ATG4B-201ENST00000344376 MPHOSPH6Q99547 160 aaKnown RBP18.74■□□□□ 0.59
ATG4B-201ENST00000344376 ABCB11O95342 1321 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 LOC102724159A0A0B4J2E5 919 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 DUSP11O75319 330 aaKnown RBP18.73■□□□□ 0.59
ATG4B-201ENST00000344376 PWP2Q15269 919 aaKnown RBP18.73■□□□□ 0.59
ATG4B-201ENST00000344376 CCDC144BQ3MJ40 725 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-201ENST00000344376 CLEC4DQ8WXI8 215 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 LENG1Q96BZ8 264 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-201ENST00000344376 ZMYND8Q9ULU4 1186 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-201ENST00000344376 CEP290O15078 2479 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 SYNRGQ9UMZ2 1314 aa18.73■□□□□ 0.59
ATG4B-201ENST00000344376 SLC27A2O14975 620 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 CALML3P27482 149 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 ADCYAP1R1P41586 468 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 MTA3Q9BTC8 594 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 MAF1Q9H063 256 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 PHF24Q9UPV7 400 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 ADAMTS4O75173 837 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 GRM4Q14833 912 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 QRICH1Q2TAL8 776 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 CREB3L3Q68CJ9 461 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 SLC30A10Q6XR72 485 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
ATG4B-201ENST00000344376 FBXO11Q86XK2 927 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 TSEN34Q9BSV6 310 aaKnown RBP18.72■□□□□ 0.59
ATG4B-201ENST00000344376 JMJD4Q9H9V9 463 aa18.72■□□□□ 0.59
ATG4B-201ENST00000344376 ALPK3Q96L96 1907 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 B4DLN1 442 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 MCM5P33992 734 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 ALDH5A1P51649 535 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-201ENST00000344376 MRPL12P52815 198 aaKnown RBP18.71■□□□□ 0.59
ATG4B-201ENST00000344376 ANTXR2P58335 489 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 RTP1P59025 263 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 RPS6P62753 249 aaKnown RBP18.71■□□□□ 0.59
ATG4B-201ENST00000344376 SLC39A5Q6ZMH5 540 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 RGS22Q8NE09 1264 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 KATNBL1Q9H079 304 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 VTA1Q9NP79 307 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 MAD2L2Q9UI95 211 aa18.71■□□□□ 0.59
ATG4B-201ENST00000344376 MRPL11Q9Y3B7 192 aaKnown RBP18.71■□□□□ 0.59
ATG4B-201ENST00000344376 ASTN1O14525 1302 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 PALM3A6NDB9 673 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-201ENST00000344376 PRC1O43663 620 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 C6orf222P0C671 652 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-201ENST00000344376 SYN1P17600 705 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 TNFAIP2Q03169 654 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 NECTIN1Q15223 517 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 DNERQ8NFT8 737 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 MORC4Q8TE76 937 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 AMNQ9BXJ7 453 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
ATG4B-201ENST00000344376 MOXD2PA6NHM9 499 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 TRAF1Q13077 416 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 EEPD1Q7L9B9 569 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 FBXO16Q8IX29 292 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-201ENST00000344376 PCSK9Q8NBP7 692 aaKnown RBP18.69■□□□□ 0.58
ATG4B-201ENST00000344376 IGDCC4Q8TDY8 1250 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
ATG4B-201ENST00000344376 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
ATG4B-201ENST00000344376 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
ATG4B-201ENST00000344376 RBM27Q9P2N5 1060 aaKnown RBP18.69■□□□□ 0.58
ATG4B-201ENST00000344376 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-201ENST00000344376 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 ZBTB5O15062 677 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 CST5P28325 142 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-201ENST00000344376 GJA9P57773 515 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 PDE4DQ08499 809 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 TROAPQ12815 778 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 SNX17Q15036 470 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 IQSEC1Q6DN90 963 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 NFXL1Q6ZNB6 911 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 TMTC2Q8N394 836 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms