RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PARP1P09874 1014 aaKnown RBP16.97■□□□□ 0.31
TPM3-208ENST00000341485 PRELPP51888 382 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 REXO1L1PQ8IX06 675 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 TC2NQ8N9U0 490 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 MTRQ99707 1265 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 BLZF1Q9H2G9 400 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 SHTN1A0MZ66 631 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 GMPSP49915 693 aaPredicted RBP16.97■□□□□ 0.31
TPM3-208ENST00000341485 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
TPM3-208ENST00000341485 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
TPM3-208ENST00000341485 LRRC47Q8N1G4 583 aaKnown RBP16.97■□□□□ 0.31
TPM3-208ENST00000341485 LZTS2Q9BRK4 669 aa16.97■□□□□ 0.31
TPM3-208ENST00000341485 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.31
TPM3-208ENST00000341485 WNT10BO00744 389 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 TUBB4AP04350 444 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 ADKP55263 362 aaKnown RBP16.96■□□□□ 0.31
TPM3-208ENST00000341485 CDKAL1Q5VV42 579 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 CLEC10AQ8IUN9 316 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 L2HGDHQ9H9P8 463 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.31
TPM3-208ENST00000341485 PCDHA6Q9UN73 950 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 PCDHA8Q9Y5H6 950 aa16.96■□□□□ 0.31
TPM3-208ENST00000341485 STXBP3O00186 592 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 TEX33O43247 280 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 LONP1P36776 959 aaKnown RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 TATDN1Q6P1N9 297 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 TRIM65Q6PJ69 517 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 ZBED3Q96IU2 234 aaPredicted RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 BAG1Q99933 345 aaPredicted RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 SLU7O95391 586 aaKnown RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 TNNI2P48788 182 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 ETF1P62495 437 aaKnown RBP16.95■□□□□ 0.3
TPM3-208ENST00000341485 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 HEATR3Q7Z4Q2 680 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 HOMER1Q86YM7 354 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 CTNND2Q9UQB3 1225 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
TPM3-208ENST00000341485 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
TPM3-208ENST00000341485 CCDC194A0A1B0GVG4 234 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 KLRF2D3W0D1 207 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 GDF11O95390 407 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 ABCB5Q2M3G0 1257 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 FAM83AQ86UY5 434 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
TPM3-208ENST00000341485 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
TPM3-208ENST00000341485 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
TPM3-208ENST00000341485 ZNF541Q9H0D2 1346 aa16.94■□□□□ 0.3
TPM3-208ENST00000341485 USP17L5A8MUK1 530 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 STX10O60499 249 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 LMNB1P20700 586 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 CDC25AP30304 524 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 TMEM39BQ9GZU3 492 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 TMEM60Q9H2L4 133 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 ADD3Q9UEY8 706 aaKnown RBP16.93■□□□□ 0.3
TPM3-208ENST00000341485 PPP2R2CQ9Y2T4 447 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 PHLPP2Q6ZVD8 1323 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 PDHBP11177 359 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 PBX1P40424 430 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 INF2Q27J81 1249 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
TPM3-208ENST00000341485 MYH4Q9Y623 1939 aa16.93■□□□□ 0.3
TPM3-208ENST00000341485 FANCGO15287 622 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 ZSCAN12O43309 604 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 COBLO75128 1261 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 KARSQ15046 597 aaKnown RBP16.92■□□□□ 0.3
TPM3-208ENST00000341485 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 RRAGBQ5VZM2 374 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 FRMPD2Q68DX3 1309 aaPredicted RBP16.92■□□□□ 0.3
TPM3-208ENST00000341485 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 DNAI1Q9UI46 699 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 EEF2P13639 858 aaKnown RBP16.92■□□□□ 0.3
TPM3-208ENST00000341485 TXLNAP40222 546 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 ICA1Q05084 483 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 SEPT2Q15019 361 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 TBC1D10BQ4KMP7 808 aaPredicted RBP16.92■□□□□ 0.3
TPM3-208ENST00000341485 TOGARAM2Q6ZUX3 1019 aa16.92■□□□□ 0.3
TPM3-208ENST00000341485 SAMD7Q7Z3H4 446 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms