RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 CYB5D1Q6P9G0 228 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 PI16Q6UXB8 463 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 PLPP6Q8IY26 295 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 DCLK2Q8N568 766 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 GPATCH3Q96I76 525 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 TRIM5Q9C035 493 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 SYNCQ9H7C4 482 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 COMMD8Q9NX08 183 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 TUBA8Q9NY65 449 aaPredicted RBP18.8■□□□□ 0.6
CDK11B-201ENST00000340677 WDR35Q9P2L0 1181 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 TMED5Q9Y3A6 229 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
CDK11B-201ENST00000340677 BIN1O00499 593 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 EVI5O60447 810 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 BRD3Q15059 726 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 KRT27Q7Z3Y8 459 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 ATXN10Q9UBB4 475 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 EFR3BQ9Y2G0 817 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
CDK11B-201ENST00000340677 CCZ1BP86790 482 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 CCZ1P86791 482 aaPredicted RBP18.79■□□□□ 0.6
CDK11B-201ENST00000340677 PLOD1Q02809 727 aaPredicted RBP18.79■□□□□ 0.6
CDK11B-201ENST00000340677 GNL2Q13823 731 aaKnown RBP18.79■□□□□ 0.6
CDK11B-201ENST00000340677 NUP58Q9BVL2 599 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 GPR108Q9NPR9 543 aa18.79■□□□□ 0.6
CDK11B-201ENST00000340677 ARHGEF6Q15052 776 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 PPP2R5BQ15173 497 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 BEND6Q5SZJ8 279 aaPredicted RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 NAA16Q6N069 864 aaPredicted RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SPATS2Q86XZ4 545 aaKnown RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 CCDC13Q8IYE1 715 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SRPK1Q96SB4 655 aaKnown RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 TMEM247A6NEH6 219 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 MTRF1O75570 445 aaKnown RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SSBP05455 408 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 RASSF8Q8NHQ8 419 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 PI4K2BQ8TCG2 481 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 DHTKD1Q96HY7 919 aaPredicted RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 NR1H4Q96RI1 486 aaPredicted RBP18.78■□□□□ 0.6
CDK11B-201ENST00000340677 EBF2Q9HAK2 575 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 JADE2Q9NQC1 790 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 RHBDL2Q9NX52 303 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SLC5A4Q9NY91 659 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 SAMM50Q9Y512 469 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 C4AP0C0L4 1744 aa18.78■□□□□ 0.6
CDK11B-201ENST00000340677 MGRN1O60291 552 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 LGR5O75473 907 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
CDK11B-201ENST00000340677 PENKP01210 267 aaPredicted RBP18.77■□□□□ 0.6
CDK11B-201ENST00000340677 PTF1AQ7RTS3 328 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 TRIM50Q86XT4 487 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 BCAS4Q8TDM0 211 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 TEKT4Q8WW24 435 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 MAIP1Q8WWC4 291 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 LUC7LQ9NQ29 371 aaKnown RBP18.77■□□□□ 0.6
CDK11B-201ENST00000340677 KIAA1468Q9P260 1216 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
CDK11B-201ENST00000340677 UBN2Q6ZU65 1347 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 LRP8Q14114 963 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 C6orf203Q9P0P8 240 aaPredicted RBP18.77■□□□□ 0.6
CDK11B-201ENST00000340677 ZFATQ9P243 1243 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 C2CD2Q9Y426 696 aa18.77■□□□□ 0.6
CDK11B-201ENST00000340677 LRP5O75197 1615 aa18.77■□□□□ 0.59
CDK11B-201ENST00000340677 IFIT2P09913 472 aaKnown RBP18.76■□□□□ 0.59
CDK11B-201ENST00000340677 PSMD7P51665 324 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 C2orf49Q9BVC5 232 aaPredicted RBP18.76■□□□□ 0.59
CDK11B-201ENST00000340677 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 ECHDC1Q9NTX5 307 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
CDK11B-201ENST00000340677 ATP6V0A2Q9Y487 856 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 UBR3Q6ZT12 1888 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 TMEM110-MUSTN1A8MSY1 372 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 ST18O60284 1047 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 IL15P40933 162 aaPredicted RBP18.76■□□□□ 0.59
CDK11B-201ENST00000340677 IRAK1P51617 712 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 CAMK2BQ13554 666 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 LUZP1Q86V48 1076 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 BPHLQ86WA6 291 aaPredicted RBP18.76■□□□□ 0.59
CDK11B-201ENST00000340677 TCHPQ9BT92 498 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 LNPEPQ9UIQ6 1025 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 C15orf41Q9Y2V0 281 aa18.76■□□□□ 0.59
CDK11B-201ENST00000340677 PDE8AO60658 829 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 RNF40O75150 1001 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 TMEM53Q6P2H8 277 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
CDK11B-201ENST00000340677 HNRNPLLQ8WVV9 542 aaKnown RBP18.75■□□□□ 0.59
CDK11B-201ENST00000340677 OPTNQ96CV9 577 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 PPP1R13BQ96KQ4 1090 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 IWS1Q96ST2 819 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
CDK11B-201ENST00000340677 TRIM43BA6NCK2 446 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 GOLGA8AA7E2F4 631 aa18.75■□□□□ 0.59
CDK11B-201ENST00000340677 SPTLC2O15270 562 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms