RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 AKR1A1P14550 325 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 WTAPQ15007 396 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-203ENST00000340192 TMEM67Q5HYA8 995 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 STAG2Q8N3U4 1231 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 CLEC4DQ8WXI8 215 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 XPNPEP3Q9NQH7 507 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-203ENST00000340192 ASTN1O14525 1302 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
ERCC1-203ENST00000340192 ACVR2BQ13705 512 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-203ENST00000340192 USH1GQ495M9 461 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 IGDCC4Q8TDY8 1250 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-203ENST00000340192 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
ERCC1-203ENST00000340192 SENP6Q9GZR1 1112 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-203ENST00000340192 ABHD16BQ9H3Z7 469 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 JMJD4Q9H9V9 463 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 MAD2L2Q9UI95 211 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
ERCC1-203ENST00000340192 ASB14A6NK59 587 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 KLRF2D3W0D1 207 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
ERCC1-203ENST00000340192 LRRC41Q15345 812 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 LRRC26Q2I0M4 334 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 C7orf61Q8IZ16 206 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
ERCC1-203ENST00000340192 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
ERCC1-203ENST00000340192 PRC1O43663 620 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 PGK1P00558 417 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 COL9A3Q14050 684 aaPredicted RBP17.03■□□□□ 0.32
ERCC1-203ENST00000340192 GRM4Q14833 912 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 KATNBL1Q9H079 304 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
ERCC1-203ENST00000340192 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
ERCC1-203ENST00000340192 RANBP2P49792 3224 aaKnown RBP17.02■□□□□ 0.32
ERCC1-203ENST00000340192 ADCY6O43306 1168 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 CALML3P27482 149 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 MCM5P33992 734 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 TROAPQ12815 778 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 RNF20Q5VTR2 975 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
ERCC1-203ENST00000340192 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.32
ERCC1-203ENST00000340192 ABCB11O95342 1321 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-203ENST00000340192 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-203ENST00000340192 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
ERCC1-203ENST00000340192 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 RNF180Q86T96 592 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 MTA3Q9BTC8 594 aa17.01■□□□□ 0.31
ERCC1-203ENST00000340192 ADD3Q9UEY8 706 aaKnown RBP17.01■□□□□ 0.31
ERCC1-203ENST00000340192 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-203ENST00000340192 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
ERCC1-203ENST00000340192 ADAMTS4O75173 837 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 DUSP11O75319 330 aaKnown RBP17■□□□□ 0.31
ERCC1-203ENST00000340192 SLC35G1Q2M3R5 365 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 RGS22Q8NE09 1264 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 MORC4Q8TE76 937 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 FERMT2Q96AC1 680 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 MTMR8Q96EF0 704 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 TMEM87BQ96K49 555 aa17■□□□□ 0.31
ERCC1-203ENST00000340192 BAZ2BQ9UIF8 2168 aaKnown RBP17■□□□□ 0.31
ERCC1-203ENST00000340192 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-203ENST00000340192 ZBTB5O15062 677 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-203ENST00000340192 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 EEPD1Q7L9B9 569 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 FBXO16Q8IX29 292 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-203ENST00000340192 NUP133Q8WUM0 1156 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 MYL10Q9BUA6 226 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 ZMYND8Q9ULU4 1186 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-203ENST00000340192 PHF24Q9UPV7 400 aa16.99■□□□□ 0.31
ERCC1-203ENST00000340192 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
ERCC1-203ENST00000340192 LOC102724159A0A0B4J2E5 919 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 MYADML2A6NDP7 307 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 DDAH1O94760 285 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 SYN1P17600 705 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 PWP2Q15269 919 aaKnown RBP16.98■□□□□ 0.31
ERCC1-203ENST00000340192 HABP4Q5JVS0 413 aaKnown RBP16.98■□□□□ 0.31
ERCC1-203ENST00000340192 TAPT1Q6NXT6 567 aa16.98■□□□□ 0.31
ERCC1-203ENST00000340192 SLC39A5Q6ZMH5 540 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms