RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 SNX14Q9Y5W7 946 aa13.79□□□□□ -0.2
BRPF3-201ENST00000339717 C2orf54Q08AI8 447 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 TRPM8Q7Z2W7 1104 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 PSMB7Q99436 277 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 TRIM55Q9BYV6 548 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 FAM129AQ9BZQ8 928 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 A0A1W2PQ27 194 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 A0A1W2PQ64 194 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 ANO1Q5XXA6 986 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 DNAAF2Q9NVR5 837 aaKnown RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 EIF2B2P49770 351 aaKnown RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 SKA1Q96BD8 255 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 OMA1Q96E52 524 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 EHD2Q9NZN4 543 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 PACSIN2Q9UNF0 486 aaPredicted RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 NCOA3Q9Y6Q9 1424 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 ZWINTO95229 277 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 NQO1P15559 274 aaKnown RBP13.78□□□□□ -0.2
BRPF3-201ENST00000339717 KRT15P19012 456 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 ADRM1Q16186 407 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 Q6ZUG5 572 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
BRPF3-201ENST00000339717 IQGAP2Q13576 1575 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 GYG2O15488 501 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.2
BRPF3-201ENST00000339717 CAPN1P07384 714 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 STX3Q13277 289 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 GRAMD1BQ3KR37 738 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 ARMC3Q5W041 872 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 FLCNQ8NFG4 579 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.2
BRPF3-201ENST00000339717 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.2
BRPF3-201ENST00000339717 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 CBFA2T3O75081 653 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 CDR2Q01850 454 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ITM2BQ9Y287 266 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ENC1O14682 589 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ESRRAP11474 423 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-201ENST00000339717 DDIT3P35638 169 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ST13P50502 369 aaKnown RBP13.77□□□□□ -0.21
BRPF3-201ENST00000339717 KRT76Q01546 638 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 NDNQ99608 321 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 ZWILCHQ9H900 591 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
BRPF3-201ENST00000339717 LRCH1Q9Y2L9 728 aa13.77□□□□□ -0.21
BRPF3-201ENST00000339717 CCDC189A1A4V9 331 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 GAS8O95995 478 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 MCF2P10911 925 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TRPC1P48995 793 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 MPP3Q13368 585 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 ANLNQ9NQW6 1124 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 AOX1Q06278 1338 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 MYL1P05976 194 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TFAP4Q01664 338 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TRIM16LQ309B1 348 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 ICA1LQ8NDH6 482 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TSNARE1Q96NA8 513 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 CACNA2D1P54289 1103 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 LRIG3Q6UXM1 1119 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 DDI1Q8WTU0 396 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 RABL2AQ9UBK7 228 aaPredicted RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 ATP6V0A2Q9Y487 856 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 GSTT1P30711 240 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 HDAC4P56524 1084 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 HDLBPQ00341 1268 aaKnown RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms