RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 USP17L24Q0WX57 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 KANK3Q6NY19 840 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L6PQ6QN14 398 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 SMARCE1Q969G3 411 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 ZNF830Q96NB3 372 aaPredicted RBP25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 KARSQ15046 597 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USH1GQ495M9 461 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 HS1BP3Q53T59 392 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 SYDE2Q5VT97 1194 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 TMX2Q9Y320 296 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 E2F4Q16254 413 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 ZSCAN30Q86W11 494 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 TEPSINQ96N21 525 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 TDP2O95551 362 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 OR52Z1P0C646 297 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 ZNF75DP51815 510 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 MRPL12P52815 198 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 FAM83BQ5T0W9 1011 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 HACL1Q9UJ83 578 aa25.43■■□□□ 1.66
PDLIM2-203ENST00000339162 ARFGEF1Q9Y6D6 1849 aa25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 SARSP49591 514 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 CLK2P49760 499 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 PLA2G4DQ86XP0 818 aa25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 DPF2Q92785 391 aa25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 PLIN2Q99541 437 aa25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 BPIFA3Q9BQP9 254 aa25.42■■□□□ 1.66
PDLIM2-203ENST00000339162 ARHGAP27Q6ZUM4 889 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 SH3RF1Q7Z6J0 888 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 IQUBQ8NA54 791 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 LAD1O00515 517 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 SLC37A4O43826 429 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 NT5DC1Q5TFE4 455 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 SAMD1Q6SPF0 538 aaPredicted RBP25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 PRR12Q9ULL5 1215 aa25.41■■□□□ 1.66
PDLIM2-203ENST00000339162 TECP42680 631 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 NCAPHQ15003 741 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 KIF4BQ2VIQ3 1234 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 RASSF8Q8NHQ8 419 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 BLZF1Q9H2G9 400 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 GOPCQ9HD26 462 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 TXLNAP40222 546 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 PRPHP41219 470 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 MAP3K10Q02779 954 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 TNFAIP1Q13829 316 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 PDXDC2PQ6P474 469 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 MTRQ99707 1265 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 AMNQ9BXJ7 453 aa25.4■■□□□ 1.66
PDLIM2-203ENST00000339162 PHF20L1A8MW92 1017 aa25.39■■□□□ 1.66
PDLIM2-203ENST00000339162 TXKP42681 527 aa25.39■■□□□ 1.66
PDLIM2-203ENST00000339162 STAT2P52630 851 aa25.39■■□□□ 1.66
PDLIM2-203ENST00000339162 FBXO11Q86XK2 927 aa25.39■■□□□ 1.66
PDLIM2-203ENST00000339162 DRC7Q8IY82 874 aa25.39■■□□□ 1.66
PDLIM2-203ENST00000339162 UBA7P41226 1012 aa25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 BTNL9Q6UXG8 535 aa25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 SPATA20Q8TB22 786 aa25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 CCDC34Q96HJ3 373 aa25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 DEFB129Q9H1M3 183 aa25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 TTC12Q9H892 705 aaPredicted RBP25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.39■■□□□ 1.65
PDLIM2-203ENST00000339162 MORC3Q14149 939 aa25.38■■□□□ 1.65
PDLIM2-203ENST00000339162 PRAMEF18Q5VWM3 479 aa25.38■■□□□ 1.65
PDLIM2-203ENST00000339162 ASNSP08243 561 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 MSNP26038 577 aaKnown RBP25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 STAT6P42226 847 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 DPYDQ12882 1025 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 SARM1Q6SZW1 724 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 VCPKMTQ9H867 229 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 SPON1Q9HCB6 807 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 DISC1Q9NRI5 854 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 SYNPO2Q9UMS6 1093 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 SMC2O95347 1197 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 LMOD1P29536 600 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 CALCRLQ16602 461 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 KIFC2Q96AC6 838 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 UIMC1Q96RL1 719 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 ZKSCAN5Q9Y2L8 839 aa25.37■■□□□ 1.65
PDLIM2-203ENST00000339162 MEIS2O14770 477 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 NBPF12Q5TAG4 269 aaPredicted RBP25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 GJA10Q969M2 543 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 P2RX7Q99572 595 aaKnown RBP25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 NRBP1Q9UHY1 535 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 MMP14P50281 582 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 CUL4BQ13620 913 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 NAALADL2Q58DX5 795 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 LRRC15Q8TF66 581 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 MTMR9Q96QG7 549 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 ZNF341Q9BYN7 854 aa25.36■■□□□ 1.65
PDLIM2-203ENST00000339162 SMTNL1A8MU46 457 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 RRAGBQ5VZM2 374 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 TRPM4Q8TD43 1214 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 HSD3B7Q9H2F3 369 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 FBXO28Q9NVF7 368 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 FZD1Q9UP38 647 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 DGKZQ13574 1117 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 ANGEL2Q5VTE6 544 aaKnown RBP25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 CCDC174Q6PII3 467 aa25.35■■□□□ 1.65
PDLIM2-203ENST00000339162 SMYD4Q8IYR2 804 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms