RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
SCNN1A-202ENST00000338748 SYNRGQ9UMZ2 1314 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 VIL1P09327 827 aaKnown RBP18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 TECP42680 631 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 TNNI2P48788 182 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 CLK2P49760 499 aaKnown RBP18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 QRICH1Q2TAL8 776 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 CCSER1Q9C0I3 900 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 TAL1P17542 331 aaPredicted RBP18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 GSDMDP57764 484 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 SNAP25P60880 206 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 GOLGA8FQ08AF8 430 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 GOLGA8DPQ0D2H9 430 aa18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
SCNN1A-202ENST00000338748 MYH7BA7E2Y1 1941 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 A0A1W2PRG0 241 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 RPN1P04843 607 aaKnown RBP18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 PLCG1P19174 1290 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 RRAGBQ5VZM2 374 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 PPP1R18Q6NYC8 613 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 APTXQ7Z2E3 356 aaKnown RBP18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 VSTM4Q8IW00 320 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 MMTAG2Q9BU76 263 aaKnown RBP18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 CTNND2Q9UQB3 1225 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 GDAQ9Y2T3 454 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
SCNN1A-202ENST00000338748 F5H6K3 240 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 ZBTB7AO95365 584 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 NDUFB10O96000 172 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 KLRC3Q07444 240 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 CABP7Q86V35 215 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 C16orf45Q96MC5 204 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 CNTNAP1P78357 1384 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 MYO1BO43795 1136 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 TXKP42681 527 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 CDC37Q16543 378 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 GJA10Q969M2 543 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 COL2A1P02458 1487 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 CBFA2T2O43439 604 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 IGSF22Q8N9C0 903 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 CUL5Q93034 780 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 PPP4R3BQ5MIZ7 849 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 SPATA1Q5VX52 437 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 AK8Q96MA6 479 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
SCNN1A-202ENST00000338748 SHTN1A0MZ66 631 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 KLRC4O43908 158 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 ECE1P42892 770 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 DLGAP5Q15398 846 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 CALCRLQ16602 461 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 P2RX7Q99572 595 aaKnown RBP18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.53
SCNN1A-202ENST00000338748 POTEMA6NI47 508 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 GMCL1P1Q8NEA9 526 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 TMEM39BQ9GZU3 492 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
SCNN1A-202ENST00000338748 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 UQCRHLA0A096LP55 91 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 UQCRHP07919 91 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 PRCPP42785 496 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 SPDYE2Q495Y8 402 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 ZNF658Q5TYW1 1059 aaPredicted RBP18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 TMOD2Q9NZR1 351 aa18.32■□□□□ 0.52
SCNN1A-202ENST00000338748 TEX33O43247 280 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 TERF1P54274 439 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 CT47A1Q5JQC4 288 aaPredicted RBP18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 ACER1Q8TDN7 264 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms