RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 ATRNO75882 1429 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 POTEMA6NI47 508 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 ANKRD40Q6AI12 368 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 CWC15Q9P013 229 aaKnown RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 UFL1O94874 794 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 KRT83P78385 493 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
EFCAB13-201ENST00000331493 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 OR52Z1P0C646 297 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 SLC16A2P36021 539 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 GNAQP50148 359 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 TJP1Q07157 1748 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 BTDP43251 543 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 E2F4Q16254 413 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 DNM2P50570 870 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 MYH7P12883 1935 aa13.17□□□□□ -0.3
EFCAB13-201ENST00000331493 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 TRAF5O00463 557 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 NKRFO15226 690 aaKnown RBP eCLIP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 MOCS3O95396 460 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 UBE2SQ16763 222 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 SNX29Q8TEQ0 813 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 TRIM66O15016 1216 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 CYTH3O43739 400 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 ZSCAN29Q8IWY8 852 aaPredicted RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 P2RX5Q93086 422 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 NCK2O43639 380 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 AMPD3Q01432 767 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 TRIM14Q14142 442 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 SND1Q7KZF4 910 aaKnown RBP eCLIP13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 HAUS4Q9H6D7 363 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 COL18A1P39060 1754 aa13.16□□□□□ -0.3
EFCAB13-201ENST00000331493 USP17L5A8MUK1 530 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 ARHGAP25P42331 645 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 IRX5P78411 483 aaPredicted RBP13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 CALCRLQ16602 461 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 NEK8Q86SG6 692 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 TAF1P21675 1872 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 TDP2O95551 362 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 GNA11P29992 359 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
EFCAB13-201ENST00000331493 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 ORC4O43929 436 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 MAGEA1P43355 309 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 RCAN1P53805 252 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 RASSF7Q02833 373 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 MYH6P13533 1939 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 BICDL2A1A5D9 508 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 TACC1O75410 805 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 LDHCP07864 332 aa13.14□□□□□ -0.31
EFCAB13-201ENST00000331493 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms