RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ARHGEF5Q12774 1597 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 TUBA4AP68366 448 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 ARID5AQ03989 594 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 TMED8Q6PL24 325 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 MAD1L1Q9Y6D9 718 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 BACH1O14867 736 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 EFCAB14O75071 495 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 PYGMP11217 842 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF229Q9UJW7 825 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 FAM135BQ49AJ0 1406 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 TOM1O60784 492 aa10.58□□□□□ -0.71
COL12A1-201ENST00000322507 BAG2O95816 211 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CXorf56Q9H5V9 222 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 LAD1O00515 517 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 XPO1O14980 1071 aaKnown RBP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 NLRP9Q7RTR0 991 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 SLFN12Q8IYM2 578 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 SUPT20HQ8NEM7 779 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 VCAM1P19320 739 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 DNM2P50570 870 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CUL4BQ13620 913 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 OLFM1Q99784 485 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 PMS1P54277 932 aaKnown RBP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 POSTNQ15063 836 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 LRGUKQ96M69 825 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 BIRC3Q13489 604 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 DDB1Q16531 1140 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 SYBUQ9NX95 663 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 IGHDP01880 384 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 HAUS7Q99871 368 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 IPO11Q9UI26 975 aaKnown RBP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 DNM3Q9UQ16 869 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CCDC78A2IDD5 438 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 ATP5HO75947 161 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 TRIM11Q96F44 468 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CUEDC2Q9H467 287 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-201ENST00000322507 SLC5A4Q9NY91 659 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 ABCC2Q92887 1545 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 AXIN1O15169 862 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 LAMB3Q13751 1172 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 CSRNP1Q96S65 589 aa10.58□□□□□ -0.72
COL12A1-201ENST00000322507 POLR1AO95602 1720 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 SERPINB1P30740 379 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 TRIM15Q9C019 465 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CCDC90BQ9GZT6 254 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CCNT1O60563 726 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 TRIM16O95361 564 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 SCRN3Q0VDG4 424 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 LUZP2Q86TE4 346 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 PPP1R14BQ96C90 147 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 SLC12A2P55011 1212 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 ARL10Q8N8L6 244 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CCDC197Q8NCU1 140 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 PLBD2Q8NHP8 589 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 BLMP54132 1417 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 ADGRL2O95490 1459 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 EXOC4Q96A65 974 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 GUCY1B2O75343 617 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 NLRP12P59046 1061 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 TRIM42Q8IWZ5 723 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CNBD2Q96M20 576 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 DSCC1Q9BVC3 393 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 PRR23D1E9PI22 279 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 RPSAP08865 295 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 PRR23D2P0DMB1 279 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 SFMBT2Q5VUG0 894 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 OTUD6AQ7L8S5 288 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 RPS6KA1Q15418 735 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CALCRLQ16602 461 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 DCUN1D2Q6PH85 259 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 USHBP1Q8N6Y0 703 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 CROCCQ5TZA2 2017 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 GTPBP10A4D1E9 387 aaKnown RBP10.57□□□□□ -0.72
COL12A1-201ENST00000322507 KRT26Q7Z3Y9 468 aa10.57□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF500O60304 480 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 FAPQ12884 760 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CEP78Q5JTW2 689 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CDH24Q86UP0 819 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 EXOC8Q8IYI6 725 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 IFIH1Q9BYX4 1025 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 SMARCA1P28370 1054 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ARHGEF35A5YM69 484 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms