RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ADCY7P51828 1080 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
VARS2-201ENST00000321897 MEIS1O00470 390 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 VSNL1P62760 191 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 IFT88Q13099 833 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 ITPK1Q13572 414 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
VARS2-201ENST00000321897 ENGASEQ8NFI3 743 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 GJA10Q969M2 543 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 EPN1Q9Y6I3 576 aaPredicted RBP16.91■□□□□ 0.3
VARS2-201ENST00000321897 ERVV-1B6SEH8 477 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 SLC7A5Q01650 507 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 PRR16Q569H4 304 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 MED4Q9NPJ6 270 aa16.91■□□□□ 0.3
VARS2-201ENST00000321897 A0A087WUV0 522 aaPredicted RBP16.9■□□□□ 0.3
VARS2-201ENST00000321897 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 TBC1D31Q96DN5 1066 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 TUBGCP2Q9BSJ2 902 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 TRIM37O94972 964 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 KIF4AO95239 1232 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 TBC1D8O95759 1140 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 PLCG2P16885 1265 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 FBXW10Q5XX13 1052 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 EFCAB13Q8IY85 973 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 SRBD1Q8N5C6 995 aaKnown RBP16.9■□□□□ 0.3
VARS2-201ENST00000321897 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 GDF11O95390 407 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 CASP7P55210 303 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 PDCLQ13371 301 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 KRT31Q15323 416 aa16.9■□□□□ 0.3
VARS2-201ENST00000321897 PLCG1P19174 1290 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 PRKG1Q13976 671 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 IFIH1Q9BYX4 1025 aaKnown RBP16.89■□□□□ 0.29
VARS2-201ENST00000321897 POTEMA6NI47 508 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 CSF1RP07333 972 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 H2AFXP16104 143 aaPredicted RBP16.89■□□□□ 0.29
VARS2-201ENST00000321897 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
VARS2-201ENST00000321897 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 C2orf54Q08AI8 447 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
VARS2-201ENST00000321897 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
VARS2-201ENST00000321897 FAM13AO94988 1023 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 CCDC172P0C7W6 258 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 TUBB4BP68371 445 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 EVX2Q03828 476 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 CNNM4Q6P4Q7 775 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 KRT25Q7Z3Z0 450 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 SLC24A3Q9HC58 644 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 SPATA31D1Q6ZQQ2 1576 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
VARS2-201ENST00000321897 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
VARS2-201ENST00000321897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.29
VARS2-201ENST00000321897 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 MICAL1Q8TDZ2 1067 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 ANKRD62A6NC57 917 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 KRT13P13646 458 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 ABCB4P21439 1286 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 ACTN3Q08043 901 aaPredicted RBP16.87■□□□□ 0.29
VARS2-201ENST00000321897 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■■■■□ 24.4
VARS2-201ENST00000321897 MCTP2Q6DN12 878 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 FOXR1Q6PIV2 292 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 ERMNQ8TAM6 284 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 CLRN2A0PK11 232 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 HARSP12081 509 aaKnown RBP16.87■□□□□ 0.29
VARS2-201ENST00000321897 NFIXQ14938 502 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 TXNRD3Q86VQ6 643 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
VARS2-201ENST00000321897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms