RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ABL1P00519 1130 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 MYBL1P10243 752 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NR1D1P20393 614 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 SCP2P22307 547 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 SLCO1A2P46721 670 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 SESN3P58005 492 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 BIRC2Q13490 618 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 FAM114A1Q8IWE2 563 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NOX5Q96PH1 765 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 LRRC1Q9BTT6 524 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 PDGFDQ9GZP0 370 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NBPF26B4DH59 902 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 GJC1P36383 396 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 DCAF17Q5H9S7 520 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 RESP18Q5W5W9 173 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NBPF10Q6P3W6 841 aaKnown RBP8.34□□□□□ -1.07
CDHR3-201ENST00000317716 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NBPF15Q8N660 670 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 PPP6R2O75170 966 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 USP14P54578 494 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 CUL4BQ13620 913 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 TMEM87BQ96K49 555 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 PANX2Q96RD6 677 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 COPRSQ9NQ92 184 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 NFAT5O94916 1531 aa8.34□□□□□ -1.08
CDHR3-201ENST00000317716 CYP2D7A0A087X1C5 515 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TXKP42681 527 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 MYO1EQ12965 1108 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 OR2W6PQ8NHA6 318 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 KCNV2Q8TDN2 545 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 PAGE5Q96GU1 130 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 MS4A14Q96JA4 679 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TUBGCP2Q9BSJ2 902 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TEX13AQ9BXU3 409 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-201ENST00000317716 KANSL2Q9H9L4 492 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 FAM184BQ9ULE4 1060 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 NOVA2Q9UNW9 492 aaKnown RBP8.33□□□□□ -1.08
CDHR3-201ENST00000317716 HYOU1Q9Y4L1 999 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF609O15014 1411 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TULP2O00295 520 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 RPN1P04843 607 aaKnown RBP8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TRIM14Q14142 442 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 SCARF1Q14162 830 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 TBC1D10CQ8IV04 446 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 AP1M1Q9BXS5 423 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 YIPF3Q9GZM5 350 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 NHEJ1Q9H9Q4 299 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-201ENST00000317716 MLXIPLQ9NP71 852 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 LRRC4BQ9NT99 713 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 ZSWIM5Q9P217 1185 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 HPCAL4Q9UM19 191 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 ITGA6P23229 1130 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 LRRC41Q15345 812 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-201ENST00000317716 ARL8AQ96BM9 186 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 CCDC51Q96ER9 411 aa8.33□□□□□ -1.08
CDHR3-201ENST00000317716 KDM6AO15550 1401 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 A0A1W2PRG0 241 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 PDE6AP16499 860 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 ABCB4P21439 1286 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 EIF4A3P38919 411 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 PHKA1P46020 1223 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 VPS41P49754 854 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 NAPAP54920 295 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 GKAP1Q5VSY0 366 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 VPS36Q86VN1 386 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 FANCBQ8NB91 859 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 TRIM58Q8NG06 486 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 TPX2Q9ULW0 747 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 ZNF652Q9Y2D9 606 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 OVOS2A0A0G2JMS6 1433 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 PP2D1A8MPX8 630 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 F8W031 263 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CHUKO15111 745 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CDC25CP30307 473 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 PLBD2Q8NHP8 589 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CNOT6LQ96LI5 555 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 HAUS2Q9NVX0 235 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 SEC63Q9UGP8 760 aaKnown RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 ATP8A1Q9Y2Q0 1164 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-201ENST00000317716 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
CDHR3-201ENST00000317716 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms