RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 RPAP2Q8IXW5 612 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 OR2W6PQ8NHA6 318 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 MS4A14Q96JA4 679 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 FERMT1Q9BQL6 677 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 FEZ2Q9UHY8 353 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 TAF1P21675 1872 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 KINO60870 393 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 FGAP02671 866 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 ADCY1Q08828 1119 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 NCAPHQ15003 741 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CNTROBQ8N137 903 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 NEK1Q96PY6 1258 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SLC26A6Q9BXS9 759 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CHCHD3Q9NX63 227 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 RGPD5Q99666 1765 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 CASP7P55210 303 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 TCP10Q12799 353 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 METTL16Q86W50 562 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 MAP4K1Q92918 833 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 PURBQ96QR8 312 aaKnown RBP4.03□□□□□ -1.76
GEN1-201ENST00000317402 MTRQ99707 1265 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 UBA5Q9GZZ9 404 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 ZCWPW1Q9H0M4 648 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 AATFQ9NY61 560 aaKnown RBP eCLIP4.03□□□□□ -1.76
GEN1-201ENST00000317402 SAMM50Q9Y512 469 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 SIPA1L1O43166 1804 aa4.03□□□□□ -1.76
GEN1-201ENST00000317402 ALS2Q96Q42 1657 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CETN2P41208 172 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ZNF165P49910 485 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 EIF5P55010 431 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 MXRA7P84157 204 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CDAN1Q8IWY9 1227 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CABP5Q9NP86 173 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SMTNL1A8MU46 457 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 POTEB2H3BUK9 544 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 POTEJP0CG39 1038 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PDE1CQ14123 709 aaPredicted RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 DIXDC1Q155Q3 683 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ARL10Q8N8L6 244 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 GNL3LQ9NVN8 582 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 CYP46A1Q9Y6A2 500 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 DNAH12Q6ZR08 3092 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ESYT3A0FGR9 886 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 IRS4O14654 1257 aaPredicted RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 ZBTB39O15060 712 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ABCD1P33897 745 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CCDC183Q5T5S1 534 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 TYW1BQ6NUM6 668 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 KRT26Q7Z3Y9 468 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 LRRC8AQ8IWT6 810 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 LMNTD2Q8IXW0 634 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 THOC1Q96FV9 657 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 CFAP57Q96MR6 1250 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SALL4Q9UJQ4 1053 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 NIP7Q9Y221 180 aaKnown RBP eCLIP4.02□□□□□ -1.77
GEN1-201ENST00000317402 SKAP2O75563 359 aaPredicted RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 MMS22LQ6ZRQ5 1243 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 VPS36Q86VN1 386 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 WDR75Q8IWA0 830 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 FAM118BQ9BPY3 351 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 TAB2Q9NYJ8 693 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 MUC4Q99102 2169 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 FAM205AQ6ZU69 1335 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 NEDD9Q14511 834 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CCDC152Q4G0S7 254 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PPP4R3CPQ6ZMV5 832 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 RINLQ6ZS11 566 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 LINC00116Q8NCU8 138 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CEP63Q96MT8 703 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SEPT11Q9NVA2 429 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 FHOD1Q9Y613 1164 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ZFYVE26Q68DK2 2539 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CCDC192P0DO97 292 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CYP27A1Q02318 531 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PRPF4BQ13523 1007 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 RALYLQ86SE5 291 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 ECHDC1Q9NTX5 307 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 AJAP1Q9UKB5 411 aaPredicted RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 PTPRCP08575 1304 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SCN11AQ9UI33 1791 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PTPN13Q12923 2485 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 STAMBPO95630 424 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 C2orf54Q08AI8 447 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 CUL4BQ13620 913 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 PDCD7Q8N8D1 485 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 NOA1Q8NC60 698 aaKnown RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 ATAD5Q96QE3 1844 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SPTLC3Q9NUV7 552 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 TMOD3Q9NYL9 352 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 ODF2LQ9ULJ1 636 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 USH1CQ9Y6N9 552 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SMIM24O75264 130 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 USP17L8P0C7I0 530 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 SLC16A2P36021 539 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 FAM160A1Q05DH4 1040 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 TRAF1Q13077 416 aa4.02□□□□□ -1.77
GEN1-201ENST00000317402 NAA16Q6N069 864 aaPredicted RBP4.02□□□□□ -1.77
GEN1-201ENST00000317402 CCDC73Q6ZRK6 1079 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms