RNA–Protein interactions for RNA: ENST00000316227.3

PRIMA1-201, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best) BASIC

Gene PRIMA1, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-201ENST00000316227 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
PRIMA1-201ENST00000316227 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
PRIMA1-201ENST00000316227 BRCA2P51587 3418 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 CALM1P0DP23 149 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 CALM2P0DP24 149 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 CALM3P0DP25 149 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 KIF5BP33176 963 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 CACNB2Q08289 660 aaPredicted RBP16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 Q6ZUG5 572 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 RUFY3Q7L099 469 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 AGXT2Q9BYV1 514 aa16.6■□□□□ 0.25
PRIMA1-201ENST00000316227 SMCHD1A6NHR9 2005 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 H0YGN5 161 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 NFIBO00712 420 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 CYP2C19P33261 490 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 ANAPC15P60006 121 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 USH1GQ495M9 461 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 MFSD14CQ5VZR4 134 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 MICU3Q86XE3 530 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 FGD4Q96M96 766 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 PIGSQ96S52 555 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 CYP46A1Q9Y6A2 500 aa16.59■□□□□ 0.25
PRIMA1-201ENST00000316227 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 ZBTB5O15062 677 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 GJB1P08034 283 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 GNAQP50148 359 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 FGD1P98174 961 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 CNTN2Q02246 1040 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 FBXO11Q86XK2 927 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 FAM133AQ8N9E0 248 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 BRF1Q92994 677 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 IL17RAQ96F46 866 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 SPZ1Q9BXG8 430 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 UPF3BQ9BZI7 483 aaKnown RBP16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 PAK6Q9NQU5 681 aaPredicted RBP16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 PFASO15067 1338 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 RPTORQ8N122 1335 aa16.58■□□□□ 0.24
PRIMA1-201ENST00000316227 POTEB2H3BUK9 544 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 ZBTB43O43298 467 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 TMTC3Q6ZXV5 915 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 TRPV1Q8NER1 839 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 TINF2Q9BSI4 451 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 AMNQ9BXJ7 453 aa16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 ZNFX1Q9P2E3 1918 aaKnown RBP16.57■□□□□ 0.24
PRIMA1-201ENST00000316227 ABCB11O95342 1321 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 BAZ2BQ9UIF8 2168 aaKnown RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 CAPN2P17655 700 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 CCND3P30281 292 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 GJA8P48165 433 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 RCAN1P53805 252 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 EVCP57679 992 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 TOB2Q14106 344 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 RGS22Q8NE09 1264 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 DEFB118Q96PH6 123 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 FAM217BQ9NTX9 383 aaPredicted RBP16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
PRIMA1-201ENST00000316227 ASTN1O14525 1302 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 CYBAP13498 195 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 FUT2Q10981 343 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 RTN1Q16799 776 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 PRAMEF19Q5SWL8 479 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 U2AF1L4Q8WU68 220 aaKnown RBP16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 PURBQ96QR8 312 aaKnown RBP16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 MRPL11Q9Y3B7 192 aaKnown RBP16.55■□□□□ 0.24
PRIMA1-201ENST00000316227 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 OPLAHO14841 1288 aa16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 SGPL1O95470 568 aa16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 CDC27P30260 824 aa16.54■□□□□ 0.24
PRIMA1-201ENST00000316227 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms