RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MCM7P33993 719 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 CCNA1P78396 465 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 PSMD2Q13200 908 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 RBBP5Q15291 538 aaKnown RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 VPS54Q9P1Q0 977 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 PNMA3Q9UL41 463 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 SUFUQ9UMX1 484 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ZC3H4Q9UPT8 1303 aaKnown RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ARAP2Q8WZ64 1704 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RGPD3A6NKT7 1758 aaPredicted RBP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RGPD4Q7Z3J3 1758 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 COL24A1Q17RW2 1714 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 TCP10L2B9ZVM9 353 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 IKBKBO14920 756 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 CTNND1O60716 968 aaKnown RBP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 LARGE1O95461 756 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 MUTP22033 750 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 TCP10Q12799 353 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 INF2Q27J81 1249 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RAB11FIP4Q86YS3 637 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 GOLGA5Q8TBA6 731 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 UPF1Q92900 1129 aaKnown RBP eCLIP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 FAM20AQ96MK3 541 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PHF20Q9BVI0 1012 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 ARGLU1Q9NWB6 273 aaPredicted RBP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 OGFRQ9NZT2 677 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 LRWD1Q9UFC0 647 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RXRAP19793 462 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PTPREP23469 700 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 CDC25BP30305 580 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 CHRNA5P30532 468 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 TUBB4BP68371 445 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 ALCAMQ13740 583 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 POSTNQ15063 836 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 KRBA2Q6ZNG9 492 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 TAX1BP1Q86VP1 789 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 KIAA1468Q9P260 1216 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PCDHA7Q9UN72 937 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 C10orf71Q711Q0 1435 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 MAST2Q6P0Q8 1798 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 SPDYE2BA6NHP3 402 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 CCNT1O60563 726 aaKnown RBP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PLA2G6O60733 806 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 SPDYE6P0CI01 402 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 SFPQP23246 707 aaKnown RBP eCLIP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 ZNF543Q08ER8 600 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 KIF4BQ2VIQ3 1234 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 LETM2Q2VYF4 491 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 MB21D1Q8N884 522 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PIBF1Q8WXW3 757 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 MYL10Q9BUA6 226 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 GDPD2Q9HCC8 539 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 HOXC10Q9NYD6 342 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 JRKLQ9Y4A0 524 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
SEC22A-201ENST00000309934 RAD17O75943 681 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 TRIM21P19474 475 aaKnown RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 MARCKSP29966 332 aaPredicted RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 CDR1P51861 262 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 CAMK4Q16566 473 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 ANO6Q4KMQ2 910 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 RESP18Q5W5W9 173 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 CABP7Q86V35 215 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 MKL1Q969V6 931 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PRIMPOLQ96LW4 560 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 ADD3Q9UEY8 706 aaKnown RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 EXOC7Q9UPT5 735 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 ATF5Q9Y2D1 282 aaPredicted RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PALM3A6NDB9 673 aaPredicted RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 BTBD18B2RXH4 712 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PFKFB1P16118 471 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 TROAPQ12815 778 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 ZNF174Q15697 407 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 ENOX2Q16206 610 aaKnown RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 E2F4Q16254 413 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 POTEAQ6S8J7 498 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 GBP6Q6ZN66 633 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PNMA8AQ86V59 439 aaPredicted RBP6.69□□□□□ -1.34
SEC22A-201ENST00000309934 CEP95Q96GE4 821 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 NUP58Q9BVL2 599 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 TANGO6Q9C0B7 1094 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 VWA3AA6NCI4 1184 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 TMEM232C9JQI7 657 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 STAM2O75886 525 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 SLFN14P0C7P3 912 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 GAP43P17677 238 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 PDIA5Q14554 519 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 OTUD7BQ6GQQ9 843 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 VPS36Q86VN1 386 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 DHX58Q96C10 678 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 DYNLL2Q96FJ2 89 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 MYOZ2Q9NPC6 264 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms