RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
PCDHGC4-201ENST00000306593 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 MAGEA1P43355 309 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 RAPGEF1Q13905 1077 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 ASIC2Q16515 512 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 MFAP3LO75121 409 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 DNA2P51530 1060 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 TNNC1P63316 161 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 TCP10Q12799 353 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 NTRK3Q16288 839 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SFMBT2Q5VUG0 894 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 PLVAPQ9BX97 442 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 GRM1Q13255 1194 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 PANK4Q9NVE7 773 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 PCDHA1Q9Y5I3 950 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 NMT2O60551 498 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 APBA3O96018 575 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 IVLP07476 585 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 PLCG1P19174 1290 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 LMAN1P49257 510 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 VAV2P52735 878 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 HLTFQ14527 1009 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 NFIXQ14938 502 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 KRT31Q15323 416 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
PCDHGC4-201ENST00000306593 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 SCNN1DP51172 638 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CCZ1BP86790 482 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CCZ1P86791 482 aaPredicted RBP12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 PNMA2Q9UL42 364 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 SRGAP1Q7Z6B7 1085 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CCDC170Q8IYT3 715 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 PPM1FP49593 454 aaPredicted RBP12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 ARID5AQ03989 594 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 KCNB1Q14721 858 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CENPHQ9H3R5 247 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 CNTNAP5Q8WYK1 1306 aa12.08□□□□□ -0.48
PCDHGC4-201ENST00000306593 LRRC63Q05C16 580 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 DCAF17Q5H9S7 520 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 PI4KBQ9UBF8 816 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 H0YHG0 523 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 CUL4BQ13620 913 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 DLGAP5Q15398 846 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 PPP4CP60510 307 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 GPSM2P81274 684 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 ZBED6P86452 979 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 TROAPQ12815 778 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 CCDC97Q96F63 343 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 MPHOSPH6Q99547 160 aaKnown RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 CCSER1Q9C0I3 900 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 FAM184BQ9ULE4 1060 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 SEC23AQ15436 765 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 KIAA0825Q8IV33 1275 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
PCDHGC4-201ENST00000306593 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
PCDHGC4-201ENST00000306593 DKC1O60832 514 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCDHGC4-201ENST00000306593 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
PCDHGC4-201ENST00000306593 ARHGEF35A5YM69 484 aa12.06□□□□□ -0.48
PCDHGC4-201ENST00000306593 B4DLN1 442 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms