RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 KLRC3Q07444 240 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
SCG2-201ENST00000305409 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 USH1GQ495M9 461 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
SCG2-201ENST00000305409 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 TSC1Q92574 1164 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 MORC2Q9Y6X9 1032 aaPredicted RBP12.88□□□□□ -0.35
SCG2-201ENST00000305409 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 ZBTB5O15062 677 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCG2-201ENST00000305409 PLCG1P19174 1290 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 CCDC34Q96HJ3 373 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
SCG2-201ENST00000305409 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
SCG2-201ENST00000305409 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 POTEMA6NI47 508 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 NDUFB10O96000 172 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 KIAA1755Q5JYT7 1200 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 CABP7Q86V35 215 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 ENOX1Q8TC92 643 aaKnown RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 PCDHA1Q9Y5I3 950 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 RPN1P04843 607 aaKnown RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 CALCRLQ16602 461 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
SCG2-201ENST00000305409 NBPF9Q3BBW0 867 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 GSDMAQ96QA5 445 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
SCG2-201ENST00000305409 UQCRHLA0A096LP55 91 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 TEX33O43247 280 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 UQCRHP07919 91 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
SCG2-201ENST00000305409 ZNF18P17022 549 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 MYH8P13535 1937 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 EGFRP00533 1210 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 CXCL9Q07325 125 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 CUL5Q93034 780 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 GMLQ99445 158 aa12.85□□□□□ -0.35
SCG2-201ENST00000305409 MMTAG2Q9BU76 263 aaKnown RBP12.85□□□□□ -0.35
SCG2-201ENST00000305409 ESYT2A0FGR8 921 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCG2-201ENST00000305409 PRCPP42785 496 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 MKL1Q969V6 931 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 P2RX7Q99572 595 aaKnown RBP12.84□□□□□ -0.35
SCG2-201ENST00000305409 SIPA1L1O43166 1804 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 ENTPD3O75355 529 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
SCG2-201ENST00000305409 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 PSMD1Q99460 953 aa12.84□□□□□ -0.35
SCG2-201ENST00000305409 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
SCG2-201ENST00000305409 HOXA13P31271 388 aaPredicted RBP12.83□□□□□ -0.35
SCG2-201ENST00000305409 PMS1P54277 932 aaKnown RBP12.83□□□□□ -0.35
SCG2-201ENST00000305409 ADKP55263 362 aaKnown RBP12.83□□□□□ -0.35
SCG2-201ENST00000305409 MTMR9Q96QG7 549 aa12.83□□□□□ -0.35
SCG2-201ENST00000305409 PIM2Q9P1W9 311 aa12.83□□□□□ -0.35
SCG2-201ENST00000305409 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.35
SCG2-201ENST00000305409 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.35
SCG2-201ENST00000305409 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 MARCH6O60337 910 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
SCG2-201ENST00000305409 PRPHP41219 470 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.36
SCG2-201ENST00000305409 GSDMDP57764 484 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 CPLX3Q8WVH0 158 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 MTMR8Q96EF0 704 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 CCSER1Q9C0I3 900 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
SCG2-201ENST00000305409 DDX25Q9UHL0 483 aaKnown RBP12.83□□□□□ -0.36
SCG2-201ENST00000305409 LAD1O00515 517 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms