RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 PTPREP23469 700 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
CDH23-202ENST00000299366 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 GSG1L2A8MUP6 293 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 KIF4AO95239 1232 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 GDF11O95390 407 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 LIFRP42702 1097 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 ADAM9Q13443 819 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 CFAP221Q4G0U5 840 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
CDH23-202ENST00000299366 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
CDH23-202ENST00000299366 TRIML1Q8N9V2 468 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 TRIM66O15016 1216 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 POTEMA6NI47 508 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 LRRN2O75325 713 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 CCDC172P0C7W6 258 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 FMR1Q06787 632 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH23-202ENST00000299366 PHLDB2Q86SQ0 1253 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 PSMD1Q99460 953 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
CDH23-202ENST00000299366 ERCC5P28715 1186 aaPredicted RBP16.35■□□□□ 0.21
CDH23-202ENST00000299366 EXOSC10Q01780 885 aaKnown RBP16.35■□□□□ 0.21
CDH23-202ENST00000299366 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 KRT12Q99456 494 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 PDIA6Q15084 440 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 NYAP1Q6ZVC0 841 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 PANK4Q9NVE7 773 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 ARMCX3Q9UH62 379 aaPredicted RBP16.35■□□□□ 0.21
CDH23-202ENST00000299366 INPP5BP32019 993 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 ANTXR2P58335 489 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 IFT20Q8IY31 132 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 TMEM51Q9NW97 253 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 ADAMTS1Q9UHI8 967 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 PARP3Q9Y6F1 533 aa16.35■□□□□ 0.21
CDH23-202ENST00000299366 TCP10L2B9ZVM9 353 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 BRD3Q15059 726 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 RESP18Q5W5W9 173 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 KRT26Q7Z3Y9 468 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 DDX25Q9UHL0 483 aaKnown RBP16.34■□□□□ 0.21
CDH23-202ENST00000299366 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
CDH23-202ENST00000299366 HAUS3Q68CZ6 603 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
CDH23-202ENST00000299366 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 NDUFA10O95299 355 aa16.34■□□□□ 0.21
CDH23-202ENST00000299366 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.21
CDH23-202ENST00000299366 ESYT3A0FGR9 886 aa16.33■□□□□ 0.21
CDH23-202ENST00000299366 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.21
CDH23-202ENST00000299366 CABS1Q96KC9 395 aa16.33■□□□□ 0.21
CDH23-202ENST00000299366 NEBLO76041 1014 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 PRCPP42785 496 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 CCDC105Q8IYK2 499 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 ANKRD42Q8N9B4 389 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 FAM133AQ8N9E0 248 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 IFNAR2P48551 515 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 ZBTB16Q05516 673 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 IKBKGQ9Y6K9 419 aa16.33■□□□□ 0.2
CDH23-202ENST00000299366 PDE4DIPQ5VU43 2346 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 WHAMMP3Q1A5X7 153 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 TRIM58Q8NG06 486 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 RASAL2Q9UJF2 1139 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 KRIT1O00522 736 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 NR2F2P24468 414 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 ACTN2P35609 894 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 P2RX5Q93086 422 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 CHP1Q99653 195 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 CTNNA1P35221 906 aaKnown RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 ZNF446Q9NWS9 450 aa16.32■□□□□ 0.2
CDH23-202ENST00000299366 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
CDH23-202ENST00000299366 RNF40O75150 1001 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 IFNB1P01574 187 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 TUBBP07437 444 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 PLVAPQ9BX97 442 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 TMEM260Q9NX78 707 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 MROH7-TTC4A0A0A0MT08 1334 aa16.31■□□□□ 0.2
CDH23-202ENST00000299366 LONP1P36776 959 aaKnown RBP16.31■□□□□ 0.2
CDH23-202ENST00000299366 CCDC26Q8TAB7 109 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms