RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PPP1R7Q15435 360 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 IQCGQ9H095 443 aaKnown RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 CDC23Q9UJX2 597 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 DDAH1O94760 285 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 BTDP43251 543 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 VSIG1Q86XK7 387 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 STK38LQ9Y2H1 464 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 H7C1D1 291 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 TRIM68Q6AZZ1 485 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 KLHL7Q8IXQ5 586 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 APBB1IPQ7Z5R6 666 aaPredicted RBP13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 STMN2Q93045 179 aa13.88□□□□□ -0.19
SLC6A1-201ENST00000287766 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CXCR5P32302 372 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 SEPT6Q14141 434 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CCDC50Q8IVM0 306 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 COA7Q96BR5 231 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CLTAP09496 248 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 FAM204AQ9H8W3 233 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CETN1Q12798 172 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 NEK8Q86SG6 692 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 SGMS1Q86VZ5 419 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 RASAL2Q9UJF2 1139 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 MEGF6O75095 1541 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 A6NNZ2 444 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 SLC16A2P36021 539 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 SLC1A4P43007 532 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 DOK7Q18PE1 504 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 TUBB8Q3ZCM7 444 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 RABGGTAQ92696 567 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
SLC6A1-201ENST00000287766 CPDO75976 1380 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 DNM2P50570 870 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 CDCA7Q9BWT1 371 aaPredicted RBP13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 CSF1RP07333 972 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 ICE2Q659A1 982 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 PIGSQ96S52 555 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
SLC6A1-201ENST00000287766 SRGAP2O75044 1071 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 FAM13AO94988 1023 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 PCDHA4Q9UN74 947 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 TNS3Q68CZ2 1445 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 NEDD9Q14511 834 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 WHAMMP3Q1A5X7 153 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 RDH13Q8NBN7 331 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 NAP1L3Q99457 506 aaPredicted RBP13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 ODF2LQ9ULJ1 636 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 ALDH3A1P30838 453 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 GUCY2FP51841 1108 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 CASP7P55210 303 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 KCTD16Q68DU8 428 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 TRIM7Q9C029 511 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 PLCG1P19174 1290 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 GJC1P36383 396 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 SP4Q02446 784 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 CACNA2D3Q8IZS8 1091 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 NUP58Q9BVL2 599 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 NKIRAS1Q9NYS0 192 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 COL15A1P39059 1388 aa13.85□□□□□ -0.19
SLC6A1-201ENST00000287766 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 MFAP3LO75121 409 aa13.84□□□□□ -0.19
SLC6A1-201ENST00000287766 MRRFQ96E11 262 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms