RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.19
CHMP3-201ENST00000263856 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.19
CHMP3-201ENST00000263856 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.19
CHMP3-201ENST00000263856 RUFY1Q96T51 708 aa13.83□□□□□ -0.19
CHMP3-201ENST00000263856 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 TAF1P21675 1872 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 GOLGA6BA6NDN3 693 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 EIF3CLB5ME19 914 aaKnown RBP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 TSPY3P0CV98 308 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 TSPY8P0CW00 308 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 NAPAP54920 295 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 ARID5AQ03989 594 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 EIF3CQ99613 913 aaKnown RBP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 PYM1Q9BRP8 204 aaKnown RBP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 ANAPC4Q9UJX5 808 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 CAPN11Q9UMQ6 739 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 PCDHA4Q9UN74 947 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 GOLGA6CA6NDK9 693 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 SSBP05455 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 GOLGA6DP0CG33 693 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 TXKP42681 527 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 IFIH1Q9BYX4 1025 aaKnown RBP13.83□□□□□ -0.2
CHMP3-201ENST00000263856 GOLGA6AQ9NYA3 693 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
CHMP3-201ENST00000263856 PSMD14O00487 310 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 NTSR2O95665 410 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 CCT5P48643 541 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
CHMP3-201ENST00000263856 KCTD16Q68DU8 428 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 MICALL1Q8N3F8 863 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 FAM76AQ8TAV0 307 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 LRRC15Q8TF66 581 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 P2RX5Q93086 422 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
CHMP3-201ENST00000263856 MTA3Q9BTC8 594 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 NLRC4Q9NPP4 1024 aa13.82□□□□□ -0.2
CHMP3-201ENST00000263856 PDS5AQ29RF7 1337 aaKnown RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 LRRC41Q15345 812 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 TUBB4BP68371 445 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 WDR93Q6P2C0 686 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 CACNA2D4Q7Z3S7 1137 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 DNAJC7Q99615 494 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 SLIT2O94813 1529 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 TACC1O75410 805 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 DIXDC1Q155Q3 683 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 TTI2Q6NXR4 508 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 IFT81Q8WYA0 676 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 CENPHQ9H3R5 247 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-201ENST00000263856 SAMM50Q9Y512 469 aa13.81□□□□□ -0.2
CHMP3-201ENST00000263856 LOC102724428A0A0B4J2F2 783 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 EPHB6O15197 1021 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 KLRC4O43908 158 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 MCM3P25205 808 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 ATP1A2P50993 1020 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 SIK1P57059 783 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 TTC31Q49AM3 519 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-201ENST00000263856 MAPKAPK5Q8IW41 473 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
CHMP3-201ENST00000263856 THAP9Q9H5L6 903 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 BCL9O00512 1426 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-201ENST00000263856 RAD21O60216 631 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 SRGNP10124 158 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 FECHP22830 423 aa13.8□□□□□ -0.2
CHMP3-201ENST00000263856 HIBADHP31937 336 aaKnown RBP13.8□□□□□ -0.2
CHMP3-201ENST00000263856 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
CHMP3-201ENST00000263856 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms