RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SMTNP53814 917 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 IQCA1Q86XH1 822 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 MREGQ8N565 214 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 ARFGAP2Q8N6H7 521 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 GIMAP7Q8NHV1 300 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 CEP83Q9Y592 693 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.2
CHMP2B-201ENST00000263780 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.2
CHMP2B-201ENST00000263780 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.2
CHMP2B-201ENST00000263780 TRIM49BA6NDI0 452 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 PRDM1O75626 825 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 MCM7P33993 719 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 TSEN2Q8NCE0 465 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 C3orf20Q8ND61 904 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 TMCO5BA8MYB1 307 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 PRKAB2O43741 272 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 LCA5LO95447 670 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 FGFR2P21802 821 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 GPTP24298 496 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 CDR1P51861 262 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 IQCKQ8N0W5 287 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 LCORLQ8N3X6 602 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 RNF10Q8N5U6 811 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 RABEP2Q9H5N1 569 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 ACTR5Q9H9F9 607 aaPredicted RBP13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
CHMP2B-201ENST00000263780 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 CHD4Q14839 1912 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 WNT7AO00755 349 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 PPP1R37O75864 691 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 CCNE1P24864 410 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 NEDD9Q14511 834 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 TTC19Q6DKK2 380 aaPredicted RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 ZSCAN29Q8IWY8 852 aaPredicted RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 NR1D1P20393 614 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 SLC7A5Q01650 507 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 NPY5RQ15761 445 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 NAA35Q5VZE5 725 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 PPP4R3AQ6IN85 833 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 ZNF473Q8WTR7 871 aaKnown RBP13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 P2RX5Q93086 422 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
CHMP2B-201ENST00000263780 GOLGA6L10A6NI86 522 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 CLGNO14967 610 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 IL17AQ16552 155 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 PTGISQ16647 500 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 RNF187Q5TA31 235 aaPredicted RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 CNOT6LQ96LI5 555 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC43Q96MW1 224 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 LUC7LQ9NQ29 371 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 PJA2O43164 708 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 C21orf2O43822 256 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 AKR1B10O60218 316 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 MOCS3O95396 460 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 SCG2P13521 617 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 UBA7P41226 1012 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 TMED8Q6PL24 325 aaPredicted RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 JPH2Q9BR39 696 aaPredicted RBP13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 KLC4Q9NSK0 619 aa13.75□□□□□ -0.21
CHMP2B-201ENST00000263780 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 MYO1FO00160 1098 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 IRS4O14654 1257 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 PDE8AO60658 829 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms