RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TMEM87AQ8NBN3 555 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.72e-7■□□□□ 10.9
CTDSPL2-201ENST00000260327 SPDL1Q96EA4 605 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 GJB4Q9NTQ9 266 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 hCG_2014768A0A024R1R8 64 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 IKBKBO14920 756 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 TRPA1O75762 1119 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 USP17L21D6R901 530 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZNF449Q6P9G9 518 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 Q9H521 79 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 H0Y3Z8 333 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 H7C1D1 291 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PPFIA2O75334 1257 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 GCNT3O95395 438 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PLCG2P16885 1265 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 TRPC3Q13507 836 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 RDH13Q8NBN7 331 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PGBD1Q96JS3 809 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 NOP53Q9NZM5 478 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 TNKSO95271 1327 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PPP2R5BQ15173 497 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 KRT25Q7Z3Z0 450 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 ANLNQ9NQW6 1124 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 POC1B-GALNT4F8VUJ3 575 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 BRD2P25440 801 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 SRLQ86TD4 932 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 THOC1Q96FV9 657 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 MBD5Q9P267 1494 aa10.68□□□□□ -0.7
CTDSPL2-201ENST00000260327 PPP6R2O75170 966 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 IRX4P78413 519 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 KIF23Q02241 960 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 DDB1Q16531 1140 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 VSTM4Q8IW00 320 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 SRGAP2O75044 1071 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 FTCDO95954 541 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 SLFNL1Q499Z3 407 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 FBXW10Q5XX13 1052 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 SMCO2A6NFE2 343 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAST3O60307 1309 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 NXNQ6DKJ4 435 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 MRPL44Q9H9J2 332 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 PLTPP55058 493 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 NR5A1Q13285 461 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCT6BQ92526 530 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 CXorf56Q9H5V9 222 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 GTPBP6O43824 516 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 ADCY7P51828 1080 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 OTUD6AQ7L8S5 288 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 ELAC2Q9BQ52 826 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 NFU1Q9UMS0 254 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 PLEKHG3A1L390 1219 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 BCAMP50895 628 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 HAUS3Q68CZ6 603 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 APOA5Q6Q788 366 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 PIP4K2CQ8TBX8 421 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 P3H4Q92791 437 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 C19orf44Q9H6X5 657 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 TBK1Q9UHD2 729 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 SLC4A7Q9Y6M7 1214 aa10.67□□□□□ -0.7
CTDSPL2-201ENST00000260327 LLGL1Q15334 1064 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 BSPRYQ5W0U4 402 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MYCT1Q8N699 235 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAP3K7O43318 606 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAP3K21Q5TCX8 1036 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 CEP70Q8NHQ1 597 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 CDC25AP30304 524 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 IL9RQ01113 521 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 HSP90AA5PQ58FG0 334 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 LGSNQ5TDP6 509 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 SASH1O94885 1247 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms