RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ERICH2A1L162 156 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 DNM1LO00429 736 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 BAATQ14032 418 aaPredicted RBP26.8■■□□□ 1.88
LSM4-201ENST00000252816 SART3Q15020 963 aaKnown RBP26.8■■□□□ 1.88
LSM4-201ENST00000252816 CASC1Q6TDU7 716 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 JMJD4Q9H9V9 463 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 GPHNQ9NQX3 736 aaPredicted RBP26.8■■□□□ 1.88
LSM4-201ENST00000252816 ZHX1Q9UKY1 873 aaPredicted RBP26.8■■□□□ 1.88
LSM4-201ENST00000252816 DNAH12Q6ZR08 3092 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 MCM3APO60318 1980 aa26.8■■□□□ 1.88
LSM4-201ENST00000252816 PALM3A6NDB9 673 aaPredicted RBP26.79■■□□□ 1.88
LSM4-201ENST00000252816 EVI5O60447 810 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 RARBP10826 455 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 AKR1A1P14550 325 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 ACVR2BQ13705 512 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 USH1GQ495M9 461 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 ARRDC4Q8NCT1 418 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 KATNBL1Q9H079 304 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 VAT1LQ9HCJ6 419 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 PPP4R2Q9NY27 417 aa26.79■■□□□ 1.88
LSM4-201ENST00000252816 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
LSM4-201ENST00000252816 TROAPQ12815 778 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 GRM4Q14833 912 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 LRRC41Q15345 812 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 SENP6Q9GZR1 1112 aaPredicted RBP26.78■■□□□ 1.88
LSM4-201ENST00000252816 ABHD16BQ9H3Z7 469 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 XPNPEP3Q9NQH7 507 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 NR2E3Q9Y5X4 410 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 LCTP09848 1927 aa26.78■■□□□ 1.88
LSM4-201ENST00000252816 PTPDC1A2A3K4 754 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 KLRF2D3W0D1 207 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 PRC1O43663 620 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 DHX16O60231 1041 aaKnown RBP26.77■■□□□ 1.88
LSM4-201ENST00000252816 MYCNP04198 464 aaPredicted RBP26.77■■□□□ 1.88
LSM4-201ENST00000252816 SLC35G1Q2M3R5 365 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 QRICH1Q2TAL8 776 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 SLC30A10Q6XR72 485 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 LY9Q9HBG7 655 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 FAM184BQ9ULE4 1060 aa26.77■■□□□ 1.88
LSM4-201ENST00000252816 ASB14A6NK59 587 aa26.76■■□□□ 1.87
LSM4-201ENST00000252816 ADCY6O43306 1168 aa26.76■■□□□ 1.87
LSM4-201ENST00000252816 PGK1P00558 417 aa26.76■■□□□ 1.87
LSM4-201ENST00000252816 LRRC26Q2I0M4 334 aa26.76■■□□□ 1.87
LSM4-201ENST00000252816 ERICH6BQ5W0A0 696 aa26.76■■□□□ 1.87
LSM4-201ENST00000252816 MCM5P33992 734 aa26.75■■□□□ 1.87
LSM4-201ENST00000252816 CCDC144BQ3MJ40 725 aa26.75■■□□□ 1.87
LSM4-201ENST00000252816 RNF207Q6ZRF8 634 aa26.75■■□□□ 1.87
LSM4-201ENST00000252816 C7orf61Q8IZ16 206 aa26.75■■□□□ 1.87
LSM4-201ENST00000252816 MTMR8Q96EF0 704 aa26.75■■□□□ 1.87
LSM4-201ENST00000252816 KBTBD13C9JR72 458 aa26.74■■□□□ 1.87
LSM4-201ENST00000252816 CALML3P27482 149 aa26.74■■□□□ 1.87
LSM4-201ENST00000252816 RPS6P62753 249 aaKnown RBP26.74■■□□□ 1.87
LSM4-201ENST00000252816 CATIPQ7Z7H3 387 aa26.74■■□□□ 1.87
LSM4-201ENST00000252816 RASEFQ8IZ41 740 aa26.74■■□□□ 1.87
LSM4-201ENST00000252816 MTA3Q9BTC8 594 aa26.74■■□□□ 1.87
LSM4-201ENST00000252816 ABCB11O95342 1321 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 SH2B2O14492 632 aaPredicted RBP26.73■■□□□ 1.87
LSM4-201ENST00000252816 ADAMTS4O75173 837 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 RNF20Q5VTR2 975 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 FBXO11Q86XK2 927 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 MORC4Q8TE76 937 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 TBC1D5Q92609 795 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 MYL10Q9BUA6 226 aa26.73■■□□□ 1.87
LSM4-201ENST00000252816 SYNRGQ9UMZ2 1314 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 PPP1R11O60927 126 aaPredicted RBP26.72■■□□□ 1.87
LSM4-201ENST00000252816 DUSP11O75319 330 aaKnown RBP26.72■■□□□ 1.87
LSM4-201ENST00000252816 ALDH5A1P51649 535 aaPredicted RBP26.72■■□□□ 1.87
LSM4-201ENST00000252816 ATN1P54259 1190 aaPredicted RBP26.72■■□□□ 1.87
LSM4-201ENST00000252816 ZNF654Q8IZM8 581 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 RGS22Q8NE09 1264 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 TMEM87BQ96K49 555 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 LRRC2Q9BYS8 371 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
LSM4-201ENST00000252816 ADD3Q9UEY8 706 aaKnown RBP26.72■■□□□ 1.87
LSM4-201ENST00000252816 CYTH3O43739 400 aa26.71■■□□□ 1.87
LSM4-201ENST00000252816 ADCYAP1R1P41586 468 aa26.71■■□□□ 1.87
LSM4-201ENST00000252816 EEPD1Q7L9B9 569 aa26.71■■□□□ 1.87
LSM4-201ENST00000252816 RNF180Q86T96 592 aa26.71■■□□□ 1.87
LSM4-201ENST00000252816 NUP133Q8WUM0 1156 aa26.71■■□□□ 1.87
LSM4-201ENST00000252816 LRRC37A2A6NM11 1700 aa26.7■■□□□ 1.87
LSM4-201ENST00000252816 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 IRX5P78411 483 aaPredicted RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 TSGA10IPQ3SY00 556 aa26.7■■□□□ 1.86
LSM4-201ENST00000252816 FBXO16Q8IX29 292 aaPredicted RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 KLHDC9Q8NEP7 349 aa26.7■■□□□ 1.86
LSM4-201ENST00000252816 FERMT2Q96AC1 680 aa26.7■■□□□ 1.86
LSM4-201ENST00000252816 PDGFCQ9NRA1 345 aa26.7■■□□□ 1.86
LSM4-201ENST00000252816 ZMYND8Q9ULU4 1186 aaPredicted RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 PHF24Q9UPV7 400 aa26.7■■□□□ 1.86
LSM4-201ENST00000252816 COLQQ9Y215 455 aaPredicted RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 RANBP2P49792 3224 aaKnown RBP26.7■■□□□ 1.86
LSM4-201ENST00000252816 MYADML2A6NDP7 307 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 ZBTB5O15062 677 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 DDAH1O94760 285 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 LIFRP42702 1097 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 ADCK5Q3MIX3 580 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 TAPT1Q6NXT6 567 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 NEK1Q96PY6 1258 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 PIGSQ96S52 555 aa26.69■■□□□ 1.86
LSM4-201ENST00000252816 AMNQ9BXJ7 453 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms