RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 SPATA1Q5VX52 437 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 TSC1Q92574 1164 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 TRMT1Q9NXH9 659 aaKnown RBP14.37□□□□□ -0.11
SNAI1-201ENST00000244050 TMOD2Q9NZR1 351 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 PI4KBQ9UBF8 816 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 GREB1LQ9C091 1923 aaPredicted RBP14.37□□□□□ -0.11
SNAI1-201ENST00000244050 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
SNAI1-201ENST00000244050 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
SNAI1-201ENST00000244050 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CYTH3O43739 400 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 ENTPD3O75355 529 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
SNAI1-201ENST00000244050 MCM7P33993 719 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 AFMP43652 599 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 NOVP48745 357 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CUL4BQ13620 913 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 ANKRD7Q92527 254 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 GMLQ99445 158 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 BAZ2BQ9UIF8 2168 aaKnown RBP14.36□□□□□ -0.11
SNAI1-201ENST00000244050 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 TMEM232C9JQI7 657 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CTCFP49711 727 aaPredicted RBP14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CXCL9Q07325 125 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 CIAPIN1Q6FI81 312 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 PDXDC2PQ6P474 469 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.115e-9■■■□□ 17.4
SNAI1-201ENST00000244050 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
SNAI1-201ENST00000244050 A0A1B0GTH6 734 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 PPP1R3GB7ZBB8 358 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 STXBP3O00186 592 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
SNAI1-201ENST00000244050 NR1I3Q14994 352 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 WWC2Q6AWC2 1192 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 SH3BP5LQ7L8J4 393 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 TRMT44Q8IYL2 757 aaKnown RBP14.35□□□□□ -0.11
SNAI1-201ENST00000244050 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
SNAI1-201ENST00000244050 SAMSN1Q9NSI8 373 aaKnown RBP14.35□□□□□ -0.11
SNAI1-201ENST00000244050 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
SNAI1-201ENST00000244050 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 IGKV6D-41A0A0C4DH26 115 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 CLRN2A0PK11 232 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 FAM196BA6NMK8 535 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 TCP10L2B9ZVM9 353 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 KLRF2D3W0D1 207 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 LAD1O00515 517 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 TTLL1O95922 423 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
SNAI1-201ENST00000244050 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
SNAI1-201ENST00000244050 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
SNAI1-201ENST00000244050 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
SNAI1-201ENST00000244050 HSPA8P11142 646 aaKnown RBP14.33□□□□□ -0.11
SNAI1-201ENST00000244050 TXLNAP40222 546 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 PRPHP41219 470 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 LBX1P52954 281 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 TNIP1Q15025 636 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.11
SNAI1-201ENST00000244050 CDKAL1Q5VV42 579 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 RASGRP2Q7LDG7 609 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 TMEM139Q8IV31 216 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 CCDC12Q8WUD4 166 aaPredicted RBP14.33□□□□□ -0.11
SNAI1-201ENST00000244050 ZNF592Q92610 1267 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 CSRNP1Q96S65 589 aa14.33□□□□□ -0.11
SNAI1-201ENST00000244050 ZNF70Q9UC06 446 aaPredicted RBP14.33□□□□□ -0.11
SNAI1-201ENST00000244050 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 TRAF5O00463 557 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 ARHGAP6O43182 974 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 SEMA3FQ13275 785 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 CST9Q5W186 159 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
SNAI1-201ENST00000244050 APTXQ7Z2E3 356 aaKnown RBP14.33□□□□□ -0.12
SNAI1-201ENST00000244050 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 CTAGE1Q96RT6 745 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 MTRQ99707 1265 aa14.33□□□□□ -0.12
SNAI1-201ENST00000244050 STX10O60499 249 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 PDHBP11177 359 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 CASP1P29466 404 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 ATP2B2Q01814 1243 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 DTHD1Q6ZMT9 781 aa14.32□□□□□ -0.12
SNAI1-201ENST00000244050 TC2NQ8N9U0 490 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms