RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
DDX55-201ENST00000238146 CAPS2Q9BXY5 557 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 CAPN6Q9Y6Q1 641 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 NHSL1Q5SYE7 1610 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 PLEKP08567 350 aaPredicted RBP17.3■□□□□ 0.36
DDX55-201ENST00000238146 UBA7P41226 1012 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 GYG1P46976 350 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 ITIH3Q06033 890 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 MIIPQ5JXC2 388 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 ZNF572Q7Z3I7 529 aaPredicted RBP17.3■□□□□ 0.36
DDX55-201ENST00000238146 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 CCDC42Q96M95 316 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 PCMTD1Q96MG8 357 aaPredicted RBP17.3■□□□□ 0.36
DDX55-201ENST00000238146 SH3GL2Q99962 352 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 TSGA10Q9BZW7 698 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 FAM107BQ9H098 131 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDX55-201ENST00000238146 CCNE1P24864 410 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 CCDC152Q4G0S7 254 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 MICALL1Q8N3F8 863 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
DDX55-201ENST00000238146 P2RX5Q93086 422 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
DDX55-201ENST00000238146 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
DDX55-201ENST00000238146 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 MRPS25P82663 173 aaKnown RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 SPA17Q15506 151 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 ERGIC2Q96RQ1 377 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 CCSER1Q9C0I3 900 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 DLEC1Q9Y238 1755 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 WTIPA6NIX2 430 aaPredicted RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 EBAG9O00559 213 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 ORC4O43929 436 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 TACC1O75410 805 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 MTIF2P46199 727 aaKnown RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
DDX55-201ENST00000238146 BCAS4Q8TDM0 211 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 MLXIPQ9HAP2 919 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 FAM169AQ9Y6X4 670 aa17.29■□□□□ 0.36
DDX55-201ENST00000238146 EIF3HO15372 352 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX55-201ENST00000238146 PRLRP16471 622 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 SLC7A5Q01650 507 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 TYW1BQ6NUM6 668 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 RUBCNQ92622 972 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 DRC1Q96MC2 740 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 COL22A1Q8NFW1 1626 aaPredicted RBP17.28■□□□□ 0.36
DDX55-201ENST00000238146 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 M0R2N6 131 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
DDX55-201ENST00000238146 GUCY2CP25092 1073 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 STK4Q13043 487 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 IFIH1Q9BYX4 1025 aaKnown RBP17.28■□□□□ 0.36
DDX55-201ENST00000238146 RABEP2Q9H5N1 569 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 ARHGAP20Q9P2F6 1191 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
DDX55-201ENST00000238146 BICDL2A1A5D9 508 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 MOCS3O95396 460 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX55-201ENST00000238146 GNGT1P63211 74 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 RCSD1Q6JBY9 416 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 ANKRD18AQ8IVF6 992 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 TSEN2Q8NCE0 465 aaKnown RBP17.27■□□□□ 0.36
DDX55-201ENST00000238146 OSBPL9Q96SU4 736 aa17.27■□□□□ 0.36
DDX55-201ENST00000238146 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 HNRNPH3P31942 346 aaKnown RBP17.27■□□□□ 0.35
DDX55-201ENST00000238146 PDE4DQ08499 809 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 FAM114A1Q8IWE2 563 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 BCL9O00512 1426 aa17.27■□□□□ 0.35
DDX55-201ENST00000238146 OPA1O60313 960 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 KIF5BP33176 963 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 LIG3P49916 1009 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 EPHB4P54760 987 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 INF2Q27J81 1249 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 ARL8AQ96BM9 186 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 ERLIN2O94905 339 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 EPB41P11171 864 aaKnown RBP17.26■□□□□ 0.35
DDX55-201ENST00000238146 FCER1AP12319 257 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 CXCR5P32302 372 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms