RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 NDUFA10O95299 355 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 GYPCP04921 128 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 TRIM65Q6PJ69 517 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 AK8Q96MA6 479 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 LAMB4A4D0S4 1761 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 MB21D1Q8N884 522 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 COL18A1P39060 1754 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 FAM205AQ6ZU69 1335 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 TTC26A0AVF1 554 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 TUBB4BP68371 445 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
UBE2D4-201ENST00000222402 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 LONRF2Q1L5Z9 754 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 CCDC43Q96MW1 224 aaKnown RBP16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 CCNE1P24864 410 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 SLC16A2P36021 539 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 BRD3Q15059 726 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 WHAMMP3Q1A5X7 153 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 CUEDC2Q9H467 287 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 MAP3K9P80192 1104 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 RRAGAQ7L523 313 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 GDAP1L1Q96MZ0 367 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 CHP1Q99653 195 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 NLRC4Q9NPP4 1024 aa16.67■□□□□ 0.26
UBE2D4-201ENST00000222402 TERF2Q15554 542 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 TMEM260Q9NX78 707 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 GPSM2P81274 684 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 CYP27A1Q02318 531 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 FUT2Q10981 343 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 SECISBP2LQ93073 1101 aaKnown RBP16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 TCEAL9Q9UHQ7 104 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 RASA1P20936 1047 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 TBX2Q13207 712 aaPredicted RBP16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 LRRC41Q15345 812 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 NCAPH2Q6IBW4 605 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 THAP9Q9H5L6 903 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
UBE2D4-201ENST00000222402 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 MYL1P05976 194 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 SLC1A4P43007 532 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 TAF3Q5VWG9 929 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 CUL5Q93034 780 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 UBE2SQ16763 222 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 CC2D1AQ6P1N0 951 aaPredicted RBP16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 TAF4BQ92750 862 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 HPS3Q969F9 1004 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 IFIH1Q9BYX4 1025 aaKnown RBP16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 ADSSL1Q8N142 457 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
UBE2D4-201ENST00000222402 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 IL17RBQ9NRM6 502 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 MAD2L2Q9UI95 211 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 CCDC151A5D8V7 595 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 POTEMA6NI47 508 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 STXBP3O00186 592 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 FCER1AP12319 257 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 MAGEA1P43355 309 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 TUBBP07437 444 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 NOP2P46087 812 aaKnown RBP16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 RCSD1Q6JBY9 416 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 CLEC10AQ8IUN9 316 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
UBE2D4-201ENST00000222402 SPDYE3A6NKU9 549 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 ERMNQ8TAM6 284 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 CAPN2P17655 700 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 PDE4CQ08493 712 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 CCSER1Q9C0I3 900 aa16.63■□□□□ 0.25
UBE2D4-201ENST00000222402 MYO1AQ9UBC5 1043 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms