RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PCDHA1Q9Y5I3 950 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 CLK2P49760 499 aaKnown RBP19.68■□□□□ 0.74
VRK1-201ENST00000216639 JAG1P78504 1218 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 RRAGBQ5VZM2 374 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 PDXDC2PQ6P474 469 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 AMNQ9BXJ7 453 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 TMEM39BQ9GZU3 492 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 SH2D4AQ9H788 454 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 TTC12Q9H892 705 aaPredicted RBP19.68■□□□□ 0.74
VRK1-201ENST00000216639 ZBTB21Q9ULJ3 1066 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 TMEM232C9JQI7 657 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 GTPBP6O43824 516 aaPredicted RBP19.68■□□□□ 0.74
VRK1-201ENST00000216639 BMP6P22004 513 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 TRAF1Q13077 416 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
VRK1-201ENST00000216639 ZNF830Q96NB3 372 aaPredicted RBP19.68■□□□□ 0.74
VRK1-201ENST00000216639 ERCC5P28715 1186 aaPredicted RBP19.67■□□□□ 0.74
VRK1-201ENST00000216639 ZNF280AP59817 542 aaPredicted RBP19.67■□□□□ 0.74
VRK1-201ENST00000216639 KARSQ15046 597 aaKnown RBP19.67■□□□□ 0.74
VRK1-201ENST00000216639 CALCRLQ16602 461 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 TMEM266Q2M3C6 531 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 CCDC186Q7Z3E2 898 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 SGIP1Q9BQI5 828 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 RAB34Q9BZG1 259 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 MAGEF1Q9HAY2 307 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 RMND1Q9NWS8 449 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 TMX2Q9Y320 296 aa19.67■□□□□ 0.74
VRK1-201ENST00000216639 CBFA2T2O43439 604 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 MYL1P05976 194 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 GCFC2P16383 781 aaKnown RBP19.66■□□□□ 0.74
VRK1-201ENST00000216639 LMOD1P29536 600 aaPredicted RBP19.66■□□□□ 0.74
VRK1-201ENST00000216639 UBE2SQ16763 222 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 PPP4R3AQ6IN85 833 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 FBXO11Q86XK2 927 aa19.66■□□□□ 0.74
VRK1-201ENST00000216639 ENOX1Q8TC92 643 aaKnown RBP19.66■□□□□ 0.74
VRK1-201ENST00000216639 NUP88Q99567 741 aaPredicted RBP19.66■□□□□ 0.74
VRK1-201ENST00000216639 A0A1W2PRG0 241 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 PTGS1P23219 599 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 CABP7Q86V35 215 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 CDC25AP30304 524 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 CAP2P40123 477 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 AP3B2Q13367 1082 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 DHX8Q14562 1220 aaKnown RBP19.65■□□□□ 0.74
VRK1-201ENST00000216639 DPF2Q92785 391 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
VRK1-201ENST00000216639 ASNSP08243 561 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 TECP42680 631 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 FXR2P51116 673 aaKnown RBP eCLIP19.64■□□□□ 0.73
VRK1-201ENST00000216639 STAT2P52630 851 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 FANCCQ00597 558 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 SEMA3FQ13275 785 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 MIGA2Q7L4E1 593 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 MTMR9Q96QG7 549 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 IMPACTQ9P2X3 320 aa19.64■□□□□ 0.73
VRK1-201ENST00000216639 PP2D1A8MPX8 630 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 SERPINC1P01008 464 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 TXKP42681 527 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 ECE1P42892 770 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 TEX2Q8IWB9 1127 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 SPICE1Q8N0Z3 855 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 IGSF22Q8N9C0 903 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 XPO4Q9C0E2 1151 aaKnown RBP19.63■□□□□ 0.73
VRK1-201ENST00000216639 FANCLQ9NW38 375 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
VRK1-201ENST00000216639 TDP2O95551 362 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 USP11P51784 963 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 PDIA5Q14554 519 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 RASA3Q14644 834 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 CHURC1Q8WUH1 139 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 STAMQ92783 540 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 HSD3B7Q9H2F3 369 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 BLZF1Q9H2G9 400 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 VCPKMTQ9H867 229 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 DDX25Q9UHL0 483 aaKnown RBP19.62■□□□□ 0.73
VRK1-201ENST00000216639 NRBP1Q9UHY1 535 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 PRR12Q9ULL5 1215 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 FZD9O00144 591 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 MARCH6O60337 910 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 FOSP01100 380 aaPredicted RBP19.62■□□□□ 0.73
VRK1-201ENST00000216639 RPN1P04843 607 aaKnown RBP19.62■□□□□ 0.73
VRK1-201ENST00000216639 CASP1P29466 404 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 GMPSP49915 693 aaPredicted RBP19.62■□□□□ 0.73
VRK1-201ENST00000216639 GSDMDP57764 484 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 CUL4BQ13620 913 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 KCNF1Q9H3M0 494 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 LRWD1Q9UFC0 647 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 NFE2L3Q9Y4A8 694 aa19.62■□□□□ 0.73
VRK1-201ENST00000216639 SLC37A4O43826 429 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 UBASH3AP57075 661 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 RASSF7Q02833 373 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 NAALADL2Q58DX5 795 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms