RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 H0Y3Z8 333 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 KCNK3O14649 394 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 GLI1P08151 1106 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 MMEP08473 750 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 MCM7P33993 719 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 ABTB2Q8N961 1025 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 FAM210AQ96ND0 272 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 NAPBQ9H115 298 aa9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.87
SUPT16H-201ENST00000216297 MTMR3Q13615 1198 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CUL3Q13618 768 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 APOA5Q6Q788 366 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 FAM114A1Q8IWE2 563 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 TUBGCP2Q9BSJ2 902 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 SRPRBQ9Y5M8 271 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 UBE2Q2LH0YL09 131 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CETN3O15182 167 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 VSIG1Q86XK7 387 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 TBC1D2BQ9UPU7 963 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 ATP8A1Q9Y2Q0 1164 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CAPN6Q9Y6Q1 641 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 ATP7AQ04656 1500 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 NEDD4P46934 1319 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 EIF4A3P38919 411 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CNKSR2Q8WXI2 1034 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 PRCCQ92733 491 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 GBP5Q96PP8 586 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 ECT2Q9H8V3 914 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 BIN2Q9UBW5 565 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 RWDD2AQ9UIY3 292 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 MTMR7Q9Y216 660 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 REXO2Q9Y3B8 237 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 USH1CQ9Y6N9 552 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 CFAP73A6NFT4 308 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 RGS16O15492 202 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 GPAA1O43292 621 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 FERP16591 822 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 UBA7P41226 1012 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 C11orf91Q3C1V1 193 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 HOOK3Q86VS8 718 aa9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 FBXO2Q9UK22 296 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 PACSIN2Q9UNF0 486 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-201ENST00000216297 RTN2O75298 545 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 PYGLP06737 847 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 ZBED6P86452 979 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 BIRC3Q13489 604 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 SLC4A4Q9Y6R1 1079 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 PFDN1O60925 122 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 LGR5O75473 907 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 CCND1P24385 295 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 KIF11P52732 1056 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 WTAPQ15007 396 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 MIS18BP1Q6P0N0 1132 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 SEPT14Q6ZU15 432 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 DDX42Q86XP3 938 aaKnown RBP eCLIP9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 CAVIN3Q969G5 261 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 PSMD1Q99460 953 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 FLT4P35916 1363 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.873e-8■■■■□ 24.8
SUPT16H-201ENST00000216297 EPHA10Q5JZY3 1008 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 FAM228AQ86W67 206 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 FBXL5Q9UKA1 691 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 CAMSAP1Q5T5Y3 1602 aa9.63□□□□□ -0.87
SUPT16H-201ENST00000216297 PRAMEF22A3QJZ6 481 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 ACTN4O43707 911 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 CREB3O43889 395 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 RAPGEF3O95398 923 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 RPN1P04843 607 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 USP4Q13107 963 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 CUL4BQ13620 913 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 UBE4AQ14139 1066 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 RPS6KA1Q15418 735 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 INTS8Q75QN2 995 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 ANKRD42Q8N9B4 389 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 MAGEC3Q8TD91 643 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 LGALS16A8MUM7 142 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 ATP4AP20648 1035 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 SLCO1A2P46721 670 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 ITGB3BPQ13352 177 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 XRCC4Q13426 336 aa9.62□□□□□ -0.87
SUPT16H-201ENST00000216297 GCKRQ14397 625 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms