RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GLI3P10071 1580 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 AKR1B10O60218 316 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 TDP2O95551 362 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 CALM1P0DP23 149 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 CALM2P0DP24 149 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 CALM3P0DP25 149 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 TCP10Q12799 353 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 NUDT12Q9BQG2 462 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 ZNHIT6Q9NWK9 470 aaKnown RBP16.87■□□□□ 0.29
EFNB1-201ENST00000204961 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 EPHB6O15197 1021 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 RFC4P35249 363 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 BTDP43251 543 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 ZSCAN26Q16670 478 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 TPTE2Q6XPS3 522 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 MB21D1Q8N884 522 aa16.87■□□□□ 0.29
EFNB1-201ENST00000204961 PACSIN2Q9UNF0 486 aaPredicted RBP16.87■□□□□ 0.29
EFNB1-201ENST00000204961 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
EFNB1-201ENST00000204961 MOCS3O95396 460 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 ARHGAP25P42331 645 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 RRAGAQ7L523 313 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 SH3RF1Q7Z6J0 888 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.86■□□□□ 0.29
EFNB1-201ENST00000204961 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 GOLPH3Q9H4A6 298 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
EFNB1-201ENST00000204961 SEC63Q9UGP8 760 aaKnown RBP16.86■□□□□ 0.29
EFNB1-201ENST00000204961 CASP8Q14790 479 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 SPATA20Q8TB22 786 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 HDAC7Q8WUI4 952 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
EFNB1-201ENST00000204961 MYH7P12883 1935 aa16.86■□□□□ 0.29
EFNB1-201ENST00000204961 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
EFNB1-201ENST00000204961 GPS2Q13227 327 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
EFNB1-201ENST00000204961 TTBK2Q6IQ55 1244 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 CEP95Q96GE4 821 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 NPHP3-ACAD11A0A0J9YXS1 232 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 ESYT3A0FGR9 886 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 FCHSD1Q86WN1 690 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 CEP112Q8N8E3 955 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 MYH10P35580 1976 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 DDAH1O94760 285 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 MYBL2P10244 700 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
EFNB1-201ENST00000204961 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
EFNB1-201ENST00000204961 MAD2L2Q9UI95 211 aa16.85■□□□□ 0.29
EFNB1-201ENST00000204961 TTF2Q9UNY4 1162 aaKnown RBP16.85■□□□□ 0.29
EFNB1-201ENST00000204961 HERVK_113P62684 666 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 GTF2IP78347 998 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 FBXO33Q7Z6M2 555 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 EHD4Q9H223 541 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 ATRNO75882 1429 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
EFNB1-201ENST00000204961 ERLIN1O75477 346 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 CALML3P27482 149 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 KCNJ6P48051 423 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 BEND6Q5SZJ8 279 aaPredicted RBP16.83■□□□□ 0.29
EFNB1-201ENST00000204961 WDR59Q6PJI9 974 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 ADSSL1Q8N142 457 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 MS4A14Q96JA4 679 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 KCND1Q9NSA2 647 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 SAR1BQ9Y6B6 198 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 MYH6P13533 1939 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 ADAMTS7Q9UKP4 1686 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 NUP98P52948 1817 aa16.83■□□□□ 0.29
EFNB1-201ENST00000204961 PDE2AO00408 941 aaPredicted RBP16.83■□□□□ 0.28
EFNB1-201ENST00000204961 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 NFRKBQ6P4R8 1299 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.83■□□□□ 0.28
EFNB1-201ENST00000204961 MEIS1O00470 390 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 PBX1P40424 430 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 CDK8P49336 464 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 RBM5P52756 815 aaKnown RBP eCLIP16.83■□□□□ 0.28
EFNB1-201ENST00000204961 HDXQ7Z353 690 aa16.83■□□□□ 0.28
EFNB1-201ENST00000204961 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
EFNB1-201ENST00000204961 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
EFNB1-201ENST00000204961 G3V3G9 751 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
EFNB1-201ENST00000204961 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
EFNB1-201ENST00000204961 RASSF7Q02833 373 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 SPA17Q15506 151 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 KCTD16Q68DU8 428 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 COG1Q8WTW3 980 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 IFT81Q8WYA0 676 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms