RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 PARP3Q9Y6F1 533 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 STX10O60499 249 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 ERCC3P19447 782 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TXKP42681 527 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 RANBP1P43487 201 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 CETN1Q12798 172 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 NR5A1Q13285 461 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TUBB2AQ13885 445 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TUBB2BQ9BVA1 445 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TRAF5O00463 557 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 PLCG2P16885 1265 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 POLE2P56282 527 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 ERMNQ8TAM6 284 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 ZSCAN10Q96SZ4 725 aaPredicted RBP13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 FAM169AQ9Y6X4 670 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 UTYO14607 1347 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 CHGBP05060 677 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 SPDL1Q96EA4 605 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 CCNT1O60563 726 aaKnown RBP13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 PTGDRQ13258 359 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 UBLCP1Q8WVY7 318 aaPredicted RBP13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 HIP1RO75146 1068 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 TNIP1Q15025 636 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 SARM1Q6SZW1 724 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
TSPAN9-201ENST00000011898 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 KCTD16Q68DU8 428 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 KIF3CO14782 793 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 PRKAB2O43741 272 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 IFNAR1P17181 557 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 STAG1Q8WVM7 1258 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 PSMB7Q99436 277 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 LRRC4BQ9NT99 713 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 GRAMD1CQ8IYS0 662 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 FOXP1Q9H334 677 aaPredicted RBP13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
TSPAN9-201ENST00000011898 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 PPP1R2P41236 205 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 SPATS2Q86XZ4 545 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 GPIHBP1Q8IV16 184 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 TCHPQ9BT92 498 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 ZC3H12CQ9C0D7 883 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 A0A1W2PRG0 241 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 SETDB1Q15047 1291 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 WDR78Q5VTH9 848 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 CNNM4Q6P4Q7 775 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 SYMPKQ92797 1274 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 JAKMIP2Q96AA8 810 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 PSMD1Q99460 953 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 TJP1Q07157 1748 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 ENO4A6NNW6 628 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 RFC1P35251 1148 aaPredicted RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 CHRNDQ07001 517 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 NONOQ15233 471 aaKnown RBP eCLIP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 INTS8Q75QN2 995 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 TAOK3Q9H2K8 898 aa13.41□□□□□ -0.26
TSPAN9-201ENST00000011898 GBP1P32455 592 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 MCAMP43121 646 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 EIF6P56537 245 aaKnown RBP13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 RNASE9P60153 205 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms