RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 COG1Q8WTW3 980 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 RRP36Q96EU6 259 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 CNOT6LQ96LI5 555 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 ACBD3Q9H3P7 528 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 PCDHA4Q9UN74 947 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MINPP1Q9UNW1 487 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MYH13Q9UKX3 1938 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ARAP2Q8WZ64 1704 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 A0A1W2PQC6 194 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 EIF3CLB5ME19 914 aaKnown RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 EPHB6O15197 1021 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 PLCG1P19174 1290 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 PDE4DQ08499 809 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 GOLGA6L1Q8N7Z2 621 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 GIMAP8Q8ND71 665 aaPredicted RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 EIF3CQ99613 913 aaKnown RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 TTYH3Q9C0H2 523 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 NOC4LQ9BVI4 516 aaKnown RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 ZNHIT6Q9NWK9 470 aaKnown RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 DMGDHQ9UI17 866 aaKnown RBP15.68■□□□□ 0.1
USH1C-201ENST00000005226 CAPN6Q9Y6Q1 641 aa15.68■□□□□ 0.1
USH1C-201ENST00000005226 MOCS3O95396 460 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 CYLC1P35663 651 aaPredicted RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 MEA1Q16626 185 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 CRACR2AQ9BSW2 395 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 LRRC1Q9BTT6 524 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 KBTBD4Q9NVX7 518 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 NCK2O43639 380 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 CYTH3O43739 400 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 ORC4O43929 436 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 RHOBTB3O94955 611 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
USH1C-201ENST00000005226 ASIC1P78348 528 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 SLC44A5Q8NCS7 719 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 FAM207AQ9NSI2 230 aaPredicted RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 RPS6KA5O75582 802 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 IPO7O95373 1038 aaKnown RBP15.67■□□□□ 0.1
USH1C-201ENST00000005226 TUBBP07437 444 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 CALML3P27482 149 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 MIIPQ5JXC2 388 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
USH1C-201ENST00000005226 P2RX5Q93086 422 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 SLC39A2Q9NP94 309 aa15.67■□□□□ 0.1
USH1C-201ENST00000005226 CACNA1SQ13698 1873 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 LETM2Q2VYF4 491 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 NFRKBQ6P4R8 1299 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 PACS2Q86VP3 889 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 CRNKL1Q9BZJ0 848 aaKnown RBP15.66■□□□□ 0.1
USH1C-201ENST00000005226 ZBED6P86452 979 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 KIF5AQ12840 1032 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 KCNB1Q14721 858 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 MAP9Q49MG5 647 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 PARP10Q53GL7 1025 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 CABP7Q86V35 215 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 TXNRD3Q86VQ6 643 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 CREG2Q8IUH2 290 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 SECISBP2LQ93073 1101 aaKnown RBP15.66■□□□□ 0.1
USH1C-201ENST00000005226 VIPAS39Q9H9C1 493 aa15.66■□□□□ 0.1
USH1C-201ENST00000005226 KIF5BP33176 963 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 TECP42680 631 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 DNA2P51530 1060 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 CKAP4Q07065 602 aaKnown RBP15.65■□□□□ 0.1
USH1C-201ENST00000005226 UBE4AQ14139 1066 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 M0R2N6 131 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 ZPR1O75312 459 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 CCNE1P24864 410 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 CCDC155Q8N6L0 562 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 TRIM9Q9C026 710 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 VAT1LQ9HCJ6 419 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 MAD2L2Q9UI95 211 aa15.65■□□□□ 0.1
USH1C-201ENST00000005226 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 MMRN2Q9H8L6 949 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 MKRN1Q9UHC7 482 aaKnown RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 STX8Q9UNK0 236 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 GOLGA6BA6NDN3 693 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 CCNT1O60563 726 aaKnown RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 EIF4A3P38919 411 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms