RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Gm5934D3Z4U6 212 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Slc39a2G3X943 309 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Rb1P13405 921 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ifnar1P33896 590 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Mars2Q499X9 586 aaKnown RBP12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 GypcQ78HU7 95 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ankrd23Q812A3 306 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Vipas39Q8BGQ1 491 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Epha10Q8BYG9 1007 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 LgsnQ8CIX8 563 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 ApobrQ8VBT6 942 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Scrn1Q9CZC8 414 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Armc9Q9D2I5 817 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Mss51Q9D5Z5 446 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Abhd2Q9QXM0 425 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Frmd7A2AD83 703 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Mx1P09922 631 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Surf6P70279 355 aaKnown RBP12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Plekha7Q3UIL6 1118 aaKnown RBP12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Rbbp5Q8BX09 538 aaKnown RBP12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ildr1Q8CBR1 537 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Trim29Q8R2Q0 587 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Eps8l1Q8R5F8 716 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Trap1Q9CQN1 706 aaKnown RBP12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 CpvlQ9D3S9 478 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 FliiQ9JJ28 1271 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Dnajc7Q9QYI3 494 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Myh7Q91Z83 1935 aa12.72□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 MetP16056 1379 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Grik3B1AS29 919 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Gm10378F6XQQ1 160 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Dctn1O08788 1281 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Parp1P11103 1013 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Tmem60Q8K174 133 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Exoc1Q8R3S6 894 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ndufab1Q9CR21 156 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ubxn8Q9QZ49 277 aa12.71□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Akap11E9Q777 1895 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mrc1Q61830 1456 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Trim34bJ3QNR8 485 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nat1P50294 290 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Stim2P83093 746 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Il17raQ60943 864 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 B4galnt4Q766D5 1034 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 GopcQ8BH60 463 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Zdhhc14Q8BQQ1 489 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nup133Q8R0G9 1155 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Zbtb1Q91VL9 713 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Bap1Q99PU7 728 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Arpp21Q9DCB4 807 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Prl2c5Q9JLV9 222 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pex3Q9QXY9 372 aa12.71□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gm4340L7N2C4 268 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 CltaO08585 235 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Cpsf2O35218 782 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Api5O35841 504 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 IntuQ059U7 942 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Hdac4Q6NZM9 1076 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Sept9Q80UG5 583 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Olfm5Q8BU90 496 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Slc9b1Q8C0X2 565 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Amigo3Q8C2S7 508 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 VillQ91YD6 859 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ascc1Q9D8Z1 356 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tmem132bF7BAB2 1078 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gucy1b3O54865 620 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Sem1P60897 70 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tubb4bP68372 445 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 HelqQ2VPA6 1069 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 SfswapQ3USH5 945 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 A1cfQ5YD48 595 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Fnbp4Q6ZQ03 1031 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Jade2Q6ZQF7 829 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 PreplQ8C167 725 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mettl5Q8K1A0 209 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tmem134Q8R0J4 195 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nxnl2Q9D531 156 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Git2Q9JLQ2 708 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Znf609Q8BZ47 1413 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Akr1b10G5E895 316 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gjc1P28229 396 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tubb5P99024 444 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Rufy1Q8BIJ7 712 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 MyripQ8K3I4 856 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tmem143Q8VD26 458 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Erlin1Q91X78 346 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Prpf3Q922U1 683 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Plekho1Q9JIY0 408 aa12.7□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gm15262A0A140LIQ5 728 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Etnk2A7MCT6 385 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Speer4aF8VPX6 267 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Speer4dL7N216 212 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Prl2c2P04095 224 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pax3P24610 479 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Foxn3Q499D0 457 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Fxr1Q61584 677 aaKnown RBP12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tcp10aQ80W76 438 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 RadxQ8C779 850 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mta1Q8K4B0 715 aaKnown RBP12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pspc1Q8R326 523 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms