RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Sh2d4aQ9D7V1 421 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ascc1Q9D8Z1 356 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Stard3nlQ9DCI3 235 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Bag3Q9JLV1 577 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Gm28043E0CXC2 719 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Zw10O54692 779 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Q14AM7 275 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Taok3Q8BYC6 898 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Slc5a1Q8C3K6 665 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Arpc5lQ9D898 153 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 DnmbpQ6TXD4 1580 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ttll3A4Q9E5 927 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Itga9B8JK39 1036 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 FanccP50652 591 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Eif4a1P60843 406 aaKnown RBP13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cep126Q0VBV7 1103 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lrfn1Q2WF71 766 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rhpn1Q61085 643 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Prkab2Q6PAM0 271 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lsm14bQ8CGC4 385 aaKnown RBP13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Zbtb3Q91X45 518 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 3830403N18RikQ9D6C3 208 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ttc37F8VPK0 1563 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Atp7bQ64446 1462 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Stag2O35638 1231 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Gucy1b3O54865 620 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nol4P60954 483 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Stmn4P63042 189 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Gm136Q3V037 328 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 March6Q6ZQ89 909 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lca5Q80ST9 704 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nup133Q8R0G9 1155 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cplx3Q8R1B5 158 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Klhl25Q8R2P1 589 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rpa1Q8VEE4 623 aaKnown RBP13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Scrn1Q9CZC8 414 aa13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Noc2lQ9WV70 747 aaKnown RBP13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Bicc1Q99MQ1 977 aaKnown RBP13.12□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Zfp853A0A1D5RM95 733 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 ByslO54825 436 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Grm8P47743 908 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Arpc4P59999 168 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 PhbP67778 272 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 HelqQ2VPA6 1069 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 EspnlQ3UYR4 1005 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 RilpQ5ND29 369 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Bpifb6Q8BU51 449 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Sugp1Q8CH02 643 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Eif3bQ8JZQ9 803 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ferd3lQ923Z4 168 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Slc8a3S4R2P9 928 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lire1P11260 357 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Alox12eP55249 662 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cyth2P63034 400 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Usp28Q5I043 1051 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Dhx40Q6PE54 779 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Slain2Q8CI08 581 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cdca7lQ922M5 438 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Tmem131lQ3U3D7 1597 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Pdia2D3Z6P0 527 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lrrn4P59383 733 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 BcrQ6PAJ1 1270 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cyp2d12Q8BVD2 504 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Arhgap24Q8C4V1 747 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 PygbQ8CI94 843 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Eva1bQ8K2Y3 164 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Lpin2Q99PI5 893 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Igf2bp3Q9CPN8 579 aaKnown RBP13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Fam217aQ9D9W6 419 aa13.11□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Fermt1P59113 677 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ptpn14Q62130 1189 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Zrsr1Q64707 428 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ddx10Q80Y44 875 aaKnown RBP13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 U2af1l4Q8BGJ9 220 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Prkag3Q8BGM7 489 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ccser1Q8C0C4 895 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Zfp113Q8C689 439 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Kif6E9PX57 802 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nck2O55033 380 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Crnkl1P63154 690 aaKnown RBP13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Retreg2Q6NS82 541 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 RragbQ6NTA4 374 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Senp2Q91ZX6 588 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cttnbp2nlQ99LJ0 638 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Pus3Q9JI38 481 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Pkd2l2Q9JLG4 621 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Tcp11x2A2AEI7 503 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Kif1cO35071 1100 aaKnown RBP13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Taok1Q5F2E8 1001 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cnga2Q62398 664 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ifit2Q64112 472 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Krt74Q6IFZ9 495 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 AmphQ7TQF7 686 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 SympkQ80X82 1284 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Leng8Q8CBY3 785 aaKnown RBP13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Hacd3Q8K2C9 362 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Slc5a4bQ91ZP4 660 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Net1Q9Z206 595 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Aox1O54754 1333 aa13.1□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nup62clA2AG10 272 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms