RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Myl10Q62082 202 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ces3aQ63880 571 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 PigsQ6PD26 555 aaKnown RBP14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 EngaseQ8BX80 734 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Atad2Q8CDM1 1040 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ces3bQ8VCU1 571 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 AclyQ91V92 1091 aaKnown RBP14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 WtapQ9ER69 396 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Tfap4Q9JIZ5 338 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Hic1Q9R1Y5 733 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Atp1a4Q9WV27 1032 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 IkQ9Z1M8 557 aaKnown RBP14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gm5114W4VSN8 858 aa14.24□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 AW822073A0A0N4SUK1 652 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gcnt4E9Q649 455 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Stag2O35638 1231 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rad51bO35719 350 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Tmtc2Q56A06 836 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Skiv2lQ6NZR5 1244 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Fbxo11Q7TPD1 930 aaKnown RBP14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Moxd2Q7TT41 619 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Kdm4bQ91VY5 1086 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Adgrf4Q9D2L6 698 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Pmfbp1Q9WVQ0 1022 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Hmg20bQ9Z104 317 aa14.23□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 TroapB7ZNG4 668 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Dnajc2P54103 621 aaKnown RBP14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Traf3ip1Q149C2 625 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rnf20Q5DTM8 973 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Samhd1Q60710 627 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Phlda1Q62392 405 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gpcpd1Q8C0L9 675 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Defb19Q8K3I8 83 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Tmc1Q8R4P5 757 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ppp6r3Q922D4 844 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Slc5a5Q99PN0 618 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Mlh1Q9JK91 760 aa14.22□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Ncor1Q60974 2453 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Lama3Q61789 3330 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Gm29094F6Q785 221 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Vwa3bJ9JI28 736 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 StrnO55106 780 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Lnx1O70263 728 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 AcrP23578 436 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Hoxa11P31311 313 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Nucb1Q02819 459 aaKnown RBP14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 1700013D24RikQ0P521 120 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Nsrp1Q5NCR9 542 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Fam109aQ8BH49 266 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Vps53Q8CCB4 832 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Hdhd5Q91WM2 419 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Sppl3Q9CUS9 384 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 PolkQ9QUG2 852 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Galk1Q9R0N0 392 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Rad9aQ9Z0F6 389 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Suclg2Q9Z2I8 433 aa14.21□□□□□ -0.13
Ccdc28b-202ENSMUST00000106035 Phlpp2Q8BXA7 1320 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Anapc15-psA0A140T8L6 141 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Tlk2O55047 718 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 GnaqP21279 359 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Mdh1bQ5F204 500 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Grm4Q68EF4 912 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ppp2r5bQ6PD28 497 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Mcph1Q7TT79 822 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Vps37dQ810I0 261 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Dusp4Q8BFV3 398 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cnksr3Q8BMA3 555 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 9230110C19RikQ8CC70 267 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ca9Q8VHB5 437 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Lzts2Q91YU6 671 aa14.2□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Sbno2Q7TNB8 1349 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Irgm2A0A140LIF8 407 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Dnajc25A2ALW5 357 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Fbxl16A2RT62 479 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ccl26F8VQM2 93 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Gm20503G3UZK1 150 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Mt-CybP00158 381 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Mboat4P0C7A3 435 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cd72P21855 354 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Fbln1Q08879 705 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Eepd1Q3TGW2 569 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Tp53i13Q5F267 385 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Fscn1Q61553 493 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cep55Q8BT07 462 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ccdc158Q8CDI6 1109 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Vmn1r191Q8K4D0 298 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Vwa5aQ99KC8 793 aaKnown RBP14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Cmtm5Q9D6G9 156 aa14.19□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Gon4lQ9DB00 2260 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Slc6a21A0A1B0GSD2 748 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Otud7bB2RUR8 840 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Prom1O54990 867 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Calm1P0DP26 149 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Calm2P0DP27 149 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Calm3P0DP28 149 aaKnown RBP14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 EporP14753 507 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ptpn22P29352 802 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Lman2lP59481 347 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 GaaP70699 953 aa14.18□□□□□ -0.14
Ccdc28b-202ENSMUST00000106035 Ece1Q4PZA2 769 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms