RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Ifnar1P33896 590 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tbc1d2bQ3U0J8 965 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Sema4bQ62179 823 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccdc148Q6P5U8 527 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Fam177a1Q8BR63 207 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Vmn1r218Q8R261 298 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tut1Q8R3F9 869 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cabp7Q91ZM8 215 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 ThegQ9JMB1 375 aa12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Myh6Q02566 1938 aaKnown RBP12.89□□□□□ -0.35
Col9a1-202ENSMUST00000088349 PfasQ5SUR0 1337 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gm30191A0A0U1RNT7 187 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Etnk2A7MCT6 385 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tcp10bE9PYJ0 438 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tmem132bF7BAB2 1078 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Trappc10Q3TLI0 1259 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Armc2Q3URY6 854 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Myo19Q5SV80 963 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Slc13a4Q8BZ82 625 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 HmcesQ8R1M0 353 aaKnown RBP12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Trub2Q91WG3 331 aaKnown RBP12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccdc43Q9CR29 222 aaKnown RBP12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Hsd3b7Q9EQC1 369 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cd2apQ9JLQ0 637 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Snapc4Q8BP86 1333 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Herc3A6H6S0 1050 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tmtc2Q56A06 836 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Papd7Q6PB75 542 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 SowahdQ8BY98 327 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ribc1Q9D0B8 379 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Adgra3Q7TT36 1310 aa12.88□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Arid4aF8VPQ2 1261 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Sec24cG3X972 1096 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Nr1i2O54915 431 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Wee1P47810 646 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gm5592Q3V0A6 857 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tldc1Q8K0P3 455 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Mmtag2Q99LX5 260 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 ChkbO55229 394 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tubb5P99024 444 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Rbm26Q6NZN0 1012 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 RragaQ80X95 313 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cct8l1Q80YT3 562 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Vcpip1Q8CDG3 1220 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gm1993A6X8I0 212 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 SlxD3Z347 212 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Mx1P09922 631 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 AcrbpQ3V140 540 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Slc9a2Q3ZAS0 814 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ppm1eQ80TL0 749 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Spata16Q8C636 571 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Prpf6Q91YR7 941 aaKnown RBP12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ttc14Q9CSP9 761 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Akt1s1Q9D1F4 257 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cd274Q9EP73 290 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Pkd2l2Q9JLG4 621 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Peg12Q9WVA7 283 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Clip2Q9Z0H8 1047 aa12.87□□□□□ -0.35
Col9a1-202ENSMUST00000088349 JcadQ5DTX6 1320 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Nme9A0A1L1SUL6 329 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ppfibp2O35711 882 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Prl2c2P04095 224 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Man1a2P39098 641 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tmem35bQ3U0Y2 150 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cep70Q6IQY5 616 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Adcy2Q80TL1 1090 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Trim6Q8BGE7 488 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Def6Q8C2K1 630 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Lrrc41Q8K1C9 807 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Usp15Q8R5H1 981 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Eif4a3Q91VC3 411 aaKnown RBP12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Osbpl1aQ91XL9 950 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Snrnp35Q9D384 244 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Klf15Q9EPW2 415 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Shank3Q4ACU6 1730 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 MybP06876 636 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gjc1P28229 396 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Stim2P83093 746 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Wdr70Q3TWF6 657 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Oxr1Q4KMM3 866 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Znf280dQ68FE8 974 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Fam196bQ6GQV1 535 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Msl1Q6PDM1 616 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ankrd13aQ80UP5 588 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Rufy1Q8BIJ7 712 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ushbp1Q8R370 680 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Erlin1Q91X78 346 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Klra17Q9JMA4 273 aa12.86□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Copb2O55029 905 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ighmbp2P40694 993 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ano9P86044 747 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccna1Q61456 421 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Zbtb39Q6PDK0 712 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Trim9Q8C7M3 817 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Hps4Q99KG7 671 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 RtcbQ99LF4 505 aaKnown RBP12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 AfdnQ9QZQ1 1820 aaKnown RBP12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Map3k15A2AQW0 1331 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Arhgap4B1AUY3 965 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ppfia4B8QI36 1187 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms