RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Rnf138rt1Q9D9M9 248 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Slc4a9E9PUP3 929 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gm10354K7N6A0 256 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pde11aP0C1Q2 933 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Hoxa2P31245 372 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Washc4Q3UMB9 1173 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Scnn1aQ61180 699 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pip5kl1Q6U7H8 395 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Zc3h6Q8BYK8 1177 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Trap1Q9CQN1 706 aaKnown RBP13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Efcc1Q9JJF6 558 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Mkrn1Q9QXP6 481 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ak2Q9WTP6 239 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Hook1Q8BIL5 728 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Etf1Q8BWY3 437 aaKnown RBP13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tubb4aQ9D6F9 444 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pus3Q9JI38 481 aa13.42□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Aox1O54754 1333 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Eef2kO08796 724 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Xirp1O70373 1129 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Slc27a3O88561 667 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Satb1Q60611 764 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Dhx40Q6PE54 779 aaKnown RBP13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tmem87aQ8BXN9 555 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Shisa4Q8CA71 197 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Bloc1s2Q9CWG9 143 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 1700018F24RikB2RW27 314 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Ag2Q3UPL5 249 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Znf652Q5DU09 608 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tmc4Q7TQ65 694 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Pcdhb22Q91XZ8 794 aa13.41□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Exoc3l2D3YUP5 789 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cyp3a59D3Z2W7 503 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cd3dP04235 173 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Btg3P50615 252 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Rnf20Q5DTM8 973 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cnot7Q60809 285 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Iffo2Q8R2V2 512 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 PigoQ9JJI6 1093 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 SmapQ9R0P4 181 aaKnown RBP13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Med23Q80YQ2 1367 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Tbc1d2B1AVH7 922 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Klhdc9Q3USL1 350 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Slc44a1Q6X893 653 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Hps4Q99KG7 671 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Fip1l1Q9D824 581 aaKnown RBP13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Clstn1Q9EPL2 979 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Rbm8a2A0A0N4SUH6 174 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 DnttP09838 530 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Myo1bP46735 1107 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cnnm2Q3TWN3 875 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Gm4981Q3ULJ8 291 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Nek5Q7TSC3 627 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Mei4Q8BRM6 389 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Rbm41Q8JZV4 413 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 PpanQ91YU8 470 aaKnown RBP13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Srgap1Q91Z69 1062 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Cdca7lQ922M5 438 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Rbm8aQ9CWZ3 174 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Znf287Q9EQB9 759 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Plscr1Q9JJ00 328 aa13.4□□□□□ -0.26
Upk3b-201ENSMUST00000062606 Slc4a4O88343 1079 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Trim43cP86449 446 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Epas1P97481 874 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 LbrQ3U9G9 626 aaKnown RBP13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Slc9c1Q6UJY2 1175 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 PaoxQ8C0L6 504 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Atf7Q8R0S1 413 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pcdhb15Q91Y04 786 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Polr3cQ9D483 533 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Tmem79Q9D709 391 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Col11a1Q61245 1804 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Prss51A0A286YDY8 319 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Dennd3A2RT67 1274 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Bnip3O55003 187 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Abcd1P48410 736 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Dynll1P63168 89 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rnf41Q8BH75 317 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gbp9Q8BTS3 619 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Erich5Q8K0S2 362 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Lrrfip2Q91WK0 415 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Polr2aP08775 1970 aaKnown RBP13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ces1aE9PYP1 563 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pkp1P97350 728 aaKnown RBP13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Oog3Q3UWY1 500 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Nlrp9cQ66X01 1004 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Q8BZJ8 459 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Stn1Q8K2X3 378 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Lman1lQ8VCD3 505 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mical1Q8VDP3 1048 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Cep57l1Q8VDS7 400 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mrpl50Q8VDT9 159 aaKnown RBP13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Osbpl1aQ91XL9 950 aa13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mettl16Q9CQG2 553 aaKnown RBP13.39□□□□□ -0.27
Upk3b-201ENSMUST00000062606 ClgnP52194 611 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pald1P70261 859 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ubash3aQ3V3E1 624 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Micall1Q8BGT6 870 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ces1dQ8VCT4 565 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pold4Q9CWP8 107 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms