RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Scg2Q03517 617 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Kcnb1Q03717 857 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Papd7Q6PB75 542 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sdad1Q80UZ2 687 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Slc9b1Q8C0X2 565 aa10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sde2Q8K1J5 448 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Nup98Q6PFD9 1816 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gm7347D3YYI9 267 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Speer4aF8VPX6 267 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Slc12a2P55012 1205 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ppp1r7Q3UM45 361 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Dlg1Q811D0 905 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 D130040H23RikQ8BII3 405 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 LRWD1Q8BUI3 648 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fbxo18Q8K2I9 1042 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Psrc1Q9D0P7 329 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tmem47Q9JJG6 181 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pcdh11xF6ZNL5 1338 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Aco1P28271 889 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gngt1Q61012 74 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Lrsam1Q80ZI6 727 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Vcpip1Q8CDG3 1220 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Lrrc41Q8K1C9 807 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Stap2Q8R0L1 411 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tfap4Q9JIZ5 338 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Klra17Q9JMA4 273 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 EvplQ9D952 2035 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Gm1993A6X8I0 212 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 SlxD3Z347 212 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ano9P86044 747 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fkbp3Q62446 224 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 AdpgkQ8VDL4 496 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Sf3b3Q921M3 1217 aaKnown RBP10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ccdc83Q9D4V3 305 aa10.91□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 JcadQ5DTX6 1320 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Odf2A3KGV1 830 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tcp10bE9PYJ0 438 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 PurbO35295 324 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Alppl2P24823 529 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Rtkn2Q14B46 604 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Znf667Q2TL60 609 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Lrrc55Q3UY51 311 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 RragaQ80X95 313 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Bbs9Q811G0 885 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ppp2r5dQ91V89 594 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Eif4a3Q91VC3 411 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Plcb1Q9Z1B3 1216 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Psmd10Q9Z2X2 231 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Nme9A0A1L1SUL6 329 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pabpc1lA2A5N3 607 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 SarsP26638 512 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Tubb5P99024 444 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cnnm4Q69ZF7 771 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Cep70Q6IQY5 616 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Rnf187Q8BFX1 236 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Eif3cQ8R1B4 911 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 PpanQ91YU8 470 aaKnown RBP10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Fsip1Q9D3V5 435 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 AllcQ9JHX6 414 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Epb41l3Q9WV92 929 aa10.9□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Apol6B7ZC55 329 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc24E9PUW8 296 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Pip4k2aO70172 405 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ap1g2O88512 791 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mx1P09922 631 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nf2P46662 596 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nol4P60954 483 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mindy1Q76LS9 468 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Slc20a2Q80UP8 656 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cracr2bQ80ZJ8 394 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nop9Q8BMC4 636 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tldc1Q8K0P3 455 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 GlyctkQ8QZY2 523 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Pla2g12bQ99P27 195 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc43Q9CR29 222 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 March8Q9DBD2 286 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Adarb2Q9JI20 745 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Pnpla6Q3TRM4 1355 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nhsl1Q8CAF4 1587 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gm45208A0A140LJ36 292 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Akap2O54931 893 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Klra1P20937 262 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Stim2P83093 746 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nsrp1Q5NCR9 542 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Shc3Q61120 474 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Usp15Q8R5H1 981 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Prpf6Q91YR7 941 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tor1aip1Q921T2 595 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Syce1Q9D495 329 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 2310002L09RikQ9D7L5 217 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Eif6O55135 245 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 AgtP11859 477 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tal1P22091 329 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Il15P48346 162 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Znf827Q505G8 1078 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Arhgef19Q8BWA8 802 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Dclk3Q8BWQ5 790 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Slc13a4Q8BZ82 625 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hs2st1Q8R3H7 356 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Efhd1Q9D4J1 240 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms