RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Clstn1Q9EPL2 979 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 GgcxQ9QYC7 757 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 AfdnQ9QZQ1 1820 aaKnown RBP16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Krt78E9Q0F0 1068 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Prl2c3P04768 224 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Spata5Q3UMC0 893 aaKnown RBP16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ankrd13cQ3UX43 541 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Cyp24a1Q64441 514 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gja3Q64448 417 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gga2Q6P5E6 603 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Camsap3Q80VC9 1252 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc51bQ80WK2 128 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Bcl11bQ99PV8 884 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 LrmdaQ9D9B4 229 aa16.43■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Tnrc6cQ3UHC0 1690 aaKnown RBP16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Pcdh11xF6ZNL5 1338 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gm1993A6X8I0 212 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 SlxD3Z347 212 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 ErmardE9Q048 622 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gm1758F6VZZ1 202 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Flt3Q00342 1000 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Tmem60Q8K174 133 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Q9CYI0 393 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Arap2Q8BZ05 1703 aa16.42■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Hnrnph3D3Z3N4 346 aaKnown RBP16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Arid4aF8VPQ2 1261 aaKnown RBP16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Myl3P09542 204 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Hdgfl1Q2VPR5 283 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Spout1Q3UHX9 385 aaKnown RBP16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Znf697Q569E7 569 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Fbxw10Q5SUS0 1030 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 GopcQ8BH60 463 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Pak2Q8CIN4 524 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc40a1Q9JHI9 570 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Chrna9G3X8Z7 479 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Mx1P09922 631 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Hsd17b1P51656 344 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 1700013D24RikQ0P521 120 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 A1cfQ5YD48 595 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 HelbQ6NVF4 1074 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Gpbp1Q6NXH3 473 aaKnown RBP16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Cplx4Q80WM3 160 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 QarsQ8BML9 775 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc13a4Q8BZ82 625 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 PdhbQ9D051 359 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Efhd1Q9D4J1 240 aa16.41■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Pfkfb3A7UAK5 555 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ctnnd1P30999 938 aaKnown RBP16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Foxn3Q499D0 457 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Arhgap44Q5SSM3 814 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Git1Q68FF6 770 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Efcab14Q8BGQ6 484 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Psen1P49769 467 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Ssrp1Q08943 708 aaKnown RBP16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Slc9a1Q61165 820 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Tut1Q8R3F9 869 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Nip7Q9CXK8 180 aaKnown RBP16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Dydc1Q9D9T0 175 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 FignQ9ERZ6 759 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Pex3Q9QXY9 372 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Foxo4Q9WVH3 505 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 SufuQ9Z0P7 484 aa16.4■□□□□ 0.22
Ushbp1-201ENSMUST00000049184 Otud7bB2RUR8 840 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Bnip3O55003 187 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 CalrP14211 416 aaKnown RBP16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Siah1aP61092 282 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ncapg2Q6DFV1 1138 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Atp6v0a4Q920R6 833 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Dhx58Q99J87 678 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Mmtag2Q99LX5 260 aaKnown RBP16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tktl2Q9D4D4 627 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Prl2c5Q9JLV9 222 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Thsd7aQ69ZU6 1645 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Unc13bQ9Z1N9 1602 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 PrphP15331 475 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tmtc2Q56A06 836 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cnnm4Q69ZF7 771 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 RragaQ80X95 313 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 TxlnbQ8VBT1 685 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Krt82Q99M74 516 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Eef1gQ9D8N0 437 aaKnown RBP16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Gpaa1Q9WTK3 621 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Akap11E9Q777 1895 aa16.39■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Nr1i2O54915 431 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ighmbp2P40694 993 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Rasa2P58069 847 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Hmgb1P63158 215 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Erich4Q3UNU4 136 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Phactr4Q501J7 694 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Arhgef2Q60875 985 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Krt74Q6IFZ9 495 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 AarsQ8BGQ7 968 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Als2cr12Q8BVM7 383 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Slc9b1Q8C0X2 565 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 CgasQ8C6L5 507 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Parp10Q8CIE4 960 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 HdlbpQ8VDJ3 1268 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Lrrc59Q922Q8 307 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Vwa5aQ99KC8 793 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cmtr1Q9DBC3 837 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms