RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Fndc3aQ8BX90 1198 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ppp2r5dQ91V89 594 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ltb4r2Q9JJL9 360 aa20.16■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Tex13cD3YU32 604 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Nme8Q715T0 586 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Rapgef5Q8C0Q9 814 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Serpinb3bQ9D1Q5 387 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Abca8bQ8K440 1620 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Slc39a2G3X943 309 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Xrcc5P27641 732 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Spata21Q8BHW6 681 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ushbp1Q8R370 680 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Nr2f2P43135 414 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Adcy7P51829 1099 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 GopcQ8BH60 463 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Kcnh4A2A5F7 1018 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Eftud2O08810 971 aaKnown RBP20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 CaluO35887 315 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Zhx1P70121 873 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ppp2r2cQ8BG02 447 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Strn3Q9ERG2 796 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Pald1P70261 859 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Ankrd13cQ3UX43 541 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 PsdQ5DTT2 1024 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Usp50Q6P8X6 390 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 C130026I21RikQ8C898 291 aa20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Afg3l2Q8JZQ2 802 aaKnown RBP20.15■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Trip6Q9Z1Y4 480 aa20.14■□□□□ 0.82
Scaf11-201ENSMUST00000047835 Psmc4P54775 418 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Eef1dP57776 281 aaKnown RBP20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Sar1bQ9CQC9 198 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cib2Q9Z309 187 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cpsf2O35218 782 aaKnown RBP20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Churc1Q6DG52 112 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Podxl2Q8CAE9 603 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 CtsqQ91ZF4 343 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Acot3Q9QYR7 432 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Mettl14Q3UIK4 456 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ccdc57Q6PHN1 1016 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Enc1O35709 589 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Calb1P12658 261 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Sv2cQ69ZS6 727 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Slc4a7Q8BTY2 1034 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Coa7Q921H9 231 aa20.14■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Dnajc21E9Q8D0 531 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gigyf2Q6Y7W8 1291 aaKnown RBP20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Lrrc8aQ80WG5 810 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Dnajc5gQ8C632 165 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Nrbp1Q99J45 535 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 TprnA2AI08 749 aaKnown RBP20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Sema3eP70275 775 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Msh6P54276 1358 aaKnown RBP20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ddx23D3Z0M9 819 aaKnown RBP20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 EmbP21995 330 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Morc2bQ8C5W4 1022 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 DmtnQ9WV69 405 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Rnaseh2aQ9CWY8 301 aa20.13■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Krt24A1L317 512 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Aggf1Q7TN31 711 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ints5Q8CHT3 1018 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gm43638A0A0J9YU36 694 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Zfp174B9EJW5 407 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Polr2fP61219 127 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Zfp251Q6PCX8 632 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ttc27Q8CD92 847 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Sf3a3Q9D554 501 aaKnown RBP20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Irx4Q9QY61 515 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Brd2Q7JJ13 798 aaKnown RBP20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Mei1Q9D4I2 1268 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Myo1fP70248 1099 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 LdhdQ7TNG8 484 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ireb2Q811J3 963 aaKnown RBP20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Nop9Q8BMC4 636 aaKnown RBP20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Dnajc17Q91WT4 303 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 EgfrQ01279 1210 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Tfdp1Q08639 410 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ccdc125Q5U465 500 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ppp2r5cQ60996 524 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Fgd5Q80UZ0 1219 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ankk1Q8BZ25 745 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Spata2Q8K004 515 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Nup58Q8R332 587 aa20.12■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Avpr1aQ62463 423 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Znf76Q8BMU0 568 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Tpcn1Q9EQJ0 817 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Rad23aP54726 363 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Zscan2Q07230 614 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Xxylt1Q3U4G3 392 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Myef2Q8C854 591 aaKnown RBP20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ccdc7Q9D541 371 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Cbx6Q9DBY5 414 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Gm1661E9Q963 441 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Taf4E9QAP7 1042 aaKnown RBP20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Trap1aP19473 224 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Eps15P42567 897 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Dzip3Q7TPV2 1204 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Kat14Q8CID0 779 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Ighmbp2P40694 993 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Zbtb39Q6PDK0 712 aa20.11■□□□□ 0.81
Scaf11-201ENSMUST00000047835 Plcd3Q8K2J0 785 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms