RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nr3c2Q8VII8 978 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Tdrd1Q99MV1 1172 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Cry2Q9R194 592 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 NrapQ80XB4 1728 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Wdr78E9PYY5 807 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Zc3h7bF8VPP8 982 aaKnown RBP9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 PtpraP18052 829 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Pcif1P59114 706 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Krt87Q6IMF0 495 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Mtss1lQ6P9S0 715 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Garem2Q6PAJ3 880 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Dcaf8Q8N7N5 591 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Acat1Q8QZT1 424 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Golph3lQ8R088 285 aaKnown RBP9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Luzp1Q8R4U7 1068 aaKnown RBP9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Pex3Q9QXY9 372 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Vnn1Q9Z0K8 512 aa9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 AdnpQ9Z103 1108 aaKnown RBP9.86□□□□□ -0.83
Trim39-201ENSMUST00000042717 Rsbn1lD3Z0K6 821 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Has3O08650 554 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Clec11aO88200 328 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 CatspereP0DP43 985 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Hoxa11P31311 313 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Meis2P97367 477 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Siah1bQ06985 282 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Ddx49Q4FZF3 480 aaKnown RBP9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Isy1Q69ZQ2 285 aaKnown RBP9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Zcwpw1Q6IR42 630 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Trpv1Q704Y3 839 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Olfr119Q7TRJ5 321 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Sap130Q8BIH0 1057 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 E4f1Q8CCE9 783 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Lmbrd1Q8K0B2 537 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Ttc8Q8VD72 515 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 MbipQ99LQ1 341 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 4933402E13RikQ9D4D2 429 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Krt34Q9D646 392 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Sgpp1Q9JI99 430 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Mtmr9Q9Z2D0 545 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 LtbrP50284 415 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Kifap3P70188 793 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Stim2P83093 746 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Kiaa1468Q148V7 1216 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 KhsrpQ3U0V1 748 aaKnown RBP9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Nlrp2Q4PLS0 1046 aaKnown RBP9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Churc1Q6DG52 112 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 PicalmQ7M6Y3 660 aaKnown RBP9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Usp17leQ7M764 540 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Arhgef19Q8BWA8 802 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Angel2Q8K1C0 544 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Dph6Q9CQ28 267 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Atp12aQ9Z1W8 1035 aa9.85□□□□□ -0.83
Trim39-201ENSMUST00000042717 Btn2a2A4QPC6 514 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Pus7B7ZNL8 666 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Stx1aO35526 288 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Rad51bO35719 350 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Epb41l2O70318 988 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Cbx2P30658 519 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Abhd15Q5F2F2 459 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Siglec10Q80ZE3 688 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Snrnp35Q9D384 244 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Rcan3Q9JKK0 239 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Tspoap1Q7TNF8 1846 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Sycp2lA0A0M3U1B0 842 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Mms22lB1AUR6 1238 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Apol7aB2RT54 418 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 SsbP32067 415 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 NfibP97863 570 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Xxylt1Q3U4G3 392 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Adgre1Q61549 931 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Lrrcc1Q69ZB0 1026 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Ddx55Q6ZPL9 600 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Clec16aQ80U30 1036 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Vps53Q8CCB4 832 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 MyripQ8K3I4 856 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Tubgcp2Q921G8 905 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Scrn1Q9CZC8 414 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 PdhbQ9D051 359 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Erich6bQ9D4S6 220 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 NapaQ9DB05 295 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Ubiad1Q9DC60 336 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Usp14Q9JMA1 493 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Atp8b5A3FIN4 1183 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Fgfr2P21803 821 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Sdc2P43407 202 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Eif3j2Q66JS6 263 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Hdac4Q6NZM9 1076 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Sulf1Q8K007 870 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Trub2Q91WG3 331 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Mmtag2Q99LX5 260 aaKnown RBP9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Bcs1lQ9CZP5 418 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Ifi202Q9R002 445 aa9.84□□□□□ -0.83
Trim39-201ENSMUST00000042717 Cyp2j7A0A140T8U1 504 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 C87977A2A958 498 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Krt78E9Q0F0 1068 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Nedd1P33215 660 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Traf1P39428 409 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Slc2a13Q3UHK1 637 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tshz2Q68FE9 1030 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Secisbp2lQ6A098 1086 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms