RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ces3aQ63880 571 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Mtss1lQ6P9S0 715 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 BcrQ6PAJ1 1270 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Hirip3Q8BLH7 601 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Rasgrp4Q8BTM9 673 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Ces3bQ8VCU1 571 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Psmd10Q9Z2X2 231 aa16.72■□□□□ 0.27
Nup54-201ENSMUST00000038514 Speer4aF8VPX6 267 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Celf1P28659 486 aaKnown RBP16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Pafah1b1P63005 410 aaKnown RBP16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Cct5P80316 541 aaKnown RBP16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Tbc1d2bQ3U0J8 965 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Kdm7aQ3UWM4 940 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Mettl25Q6NXH8 597 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Dlg1Q811D0 905 aaKnown RBP16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Slc9b1Q8C0X2 565 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Usp15Q8R5H1 981 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Rab3il1Q8VDV3 383 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Grin3bQ91ZU9 1003 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Rhobtb3Q9CTN4 611 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Dynll2Q9D0M5 89 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Krtap5-3Q9D226 196 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Snrnp35Q9D384 244 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Pkd2l2Q9JLG4 621 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Mtmr9Q9Z2D0 545 aa16.71■□□□□ 0.27
Nup54-201ENSMUST00000038514 Fam186bD3Z420 943 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Kcna1P16388 495 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gfpt1P47856 697 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Asic1Q6NXK8 526 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ankrd23Q812A3 306 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Prl7b1Q8CGZ9 251 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Mmgt1Q8K273 131 aaKnown RBP16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 HyiQ8R1F5 277 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 PpanQ91YU8 470 aaKnown RBP16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Psma7Q9Z2U0 248 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 GakQ99KY4 1305 aa16.71■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ano3A2AHL1 981 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Akap2O54931 893 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Msh3P13705 1091 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 GnaqP21279 359 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gm5592Q3V0A6 857 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Mdh1bQ5F204 500 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ezh2Q61188 746 aaKnown RBP16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Trim6Q8BGE7 488 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Hs2st1Q8R3H7 356 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Zmym2Q9CU65 1376 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Cmtr1Q9DBC3 837 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ppp2r3dQ9Z176 491 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ppfia4B8QI36 1187 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Hnrnph3D3Z3N4 346 aaKnown RBP16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Wee1P47810 646 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Fkbp3Q62446 224 aaKnown RBP16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gimap8Q75N62 688 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Usp27Q8CEG8 438 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ddx54Q8K4L0 874 aaKnown RBP16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ppp2r5dQ91V89 594 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 EhhadhQ9DBM2 718 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 FignQ9ERZ6 759 aa16.7■□□□□ 0.26
Nup54-201ENSMUST00000038514 Bpifb4A2BGH0 617 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Akr1c19G3X9Y6 323 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Capza3P70190 299 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ssrp1Q08943 708 aaKnown RBP16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Lrrfip1Q3UZ39 729 aaKnown RBP16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Carmil2Q3V3V9 1296 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Znf280dQ68FE8 974 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Asic3Q6X1Y6 530 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Jade2Q6ZQF7 829 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Krt82Q99M74 516 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Lztfl1Q9JHQ5 299 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Angptl3Q9R182 455 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Epb41l3Q9WV92 929 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Peg12Q9WVA7 283 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Nfil3O08750 462 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Acot10Q32MW3 439 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Psg29Q3URN6 468 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Arhgef2Q60875 985 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Fxr1Q61584 677 aaKnown RBP16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Madcam1Q61826 405 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gtf3c5Q8R2T8 520 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Arpp21Q9DCB4 807 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 SyncQ9EPM5 470 aa16.69■□□□□ 0.26
Nup54-201ENSMUST00000038514 Plekhg2Q6KAU7 1340 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ppp1r7Q3UM45 361 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 Klra4Q60651 263 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 Klc3Q91W40 508 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 Plagl2Q925T4 496 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 GsdmeQ9Z2D3 512 aa16.68■□□□□ 0.26
Nup54-201ENSMUST00000038514 MybP06876 636 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gas1Q01721 343 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Rc3h1Q4VGL6 1130 aaKnown RBP16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Krit1Q6S5J6 736 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ubxn6Q99PL6 442 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Coro7Q9D2V7 922 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Eef1gQ9D8N0 437 aaKnown RBP16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 March8Q9DBD2 286 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Togaram1Q6A070 1776 aaKnown RBP16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 C4bP01029 1738 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Arhgap4B1AUY3 965 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Man1a2P39098 641 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Nsrp1Q5NCR9 542 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms