RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Spire2Q8K1S6 718 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Bzw2Q91VK1 419 aaKnown RBP10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pcdhb15Q91Y04 786 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 IcoslgQ9JHJ8 322 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Stk32bQ9JJX8 414 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Prss51A0A286YDY8 319 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 ZfxP17012 799 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rnf216P58283 853 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 RilpQ5ND29 369 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dpp8Q80YA7 892 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pdzph1Q8BGR1 1238 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gm6583E9Q8Z1 469 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gm4758L7N258 96 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lins1Q3U1D0 764 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Jade3Q6IE82 823 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Exoc3Q6KAR6 755 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Trim56Q80VI1 734 aaKnown RBP10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ccdc87Q8CDL9 855 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Fsip1Q9D3V5 435 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pus3Q9JI38 481 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Adamtsl3G3UXC7 1706 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pagr1bF6V0H0 108 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ppp1r1bQ60829 194 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pagr1aQ99L02 253 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 CactinQ9CS00 772 aaKnown RBP10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Vstm4T1NXB5 319 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lipo1J3QME6 396 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Map3k7clP58500 142 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Sap30bpQ02614 308 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cnnm4Q69ZF7 771 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Epn1Q80VP1 575 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lonp1Q8CGK3 949 aaKnown RBP10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Skor2A7M7C7 1008 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pus7B7ZNL8 666 aaKnown RBP10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nr1i2O54915 431 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mettl14Q3UIK4 456 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Fhdc1Q3ULZ2 1149 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Znf532Q6NXK2 1036 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Krt9Q6RHW0 743 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Spef2Q8C9J3 1734 aa10.91□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mageb2A2AHM0 380 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cdr1E9Q0B4 517 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rfc1P35601 1131 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Efcab14Q8BGQ6 484 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lbhd1A0A087WPA0 259 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 4932429P05RikA2ADI4 785 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Il7P10168 154 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Aggf1Q7TN31 711 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 PodnQ7TQ62 611 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 WdpcpQ8C456 722 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mb21d2Q8C525 428 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Spata16Q8C636 571 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 AdarQ99MU3 1178 aaKnown RBP10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Efcc1Q9JJF6 558 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Alpk3Q924C5 1678 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cdk4P30285 303 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Sox5P35710 763 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Irf5P56477 497 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Armc2Q3URY6 854 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rsad2Q8CBB9 362 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Znf830Q8R1N0 363 aaKnown RBP10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Sorbs3Q9R1Z8 733 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Carmil3Q3UFQ8 1375 aa10.9□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ap1b1O35643 943 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 H2afzP0C0S6 128 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 H2afvQ3THW5 128 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Zcwpw1Q6IR42 630 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Clic6Q8BHB9 596 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc18a1Q8R090 521 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Atp2a1Q8R429 994 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 EhhadhQ9DBM2 718 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm14525B1AZA0 212 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm2012B1B0R1 212 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Heatr4E9Q357 955 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Lig3P97386 1015 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Luc7l3Q5SUF2 432 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Serpinb1cQ5SV42 375 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 NntQ61941 1086 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm14819Q62478 212 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Znf365Q8BG89 408 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slfnl1Q8BHW9 410 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Smc6Q924W5 1097 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Apopt1Q9CQW7 192 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ankrd2Q9WV06 328 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Map3k15A2AQW0 1331 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sema3fO88632 785 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Adssl1P28650 457 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rtkn2Q14B46 604 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 WaplQ65Z40 1200 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 IarsQ8BU30 1262 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Fam84aQ9D650 292 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Klc4Q9DBS5 619 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccnt1Q9QWV9 724 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Myo1cQ9WTI7 1063 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nup153E9Q3G8 1462 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Speer2E9Q9U2 264 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Kcnk16G5E845 292 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Fam207aP58468 219 aaKnown RBP10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Stim2P83093 746 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Dzip1lQ499E4 774 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms