RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Gm45208A0A140LJ36 292 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Gm10378F6XQQ1 160 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 PurbO35295 324 aaKnown RBP20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Psmd14O35593 310 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ccdc34Q3UI66 367 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Kdm1aQ6ZQ88 853 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Jade2Q6ZQF7 829 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ccdc93Q7TQK5 629 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Arhgef6Q8K4I3 771 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ushbp1Q8R370 680 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Cdk8Q8R3L8 464 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 CutaQ9CQ89 177 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Knop1Q9Z2Q2 478 aaKnown RBP20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 TicrrQ8BQ33 1889 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Cacna1sQ02789 1880 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 ErmardE9Q048 622 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Slc9a2Q3ZAS0 814 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Prdm4Q80V63 803 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Tbc1d23Q8K0F1 684 aa20.56■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Vmn2r71L7N2D8 855 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ifnar1P33896 590 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Gfpt1P47856 697 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Eya3P97480 510 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Tbc1d2bQ3U0J8 965 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Rbm5Q91YE7 815 aaKnown RBP20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Sh2b1Q91ZM2 756 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Hsd3b7Q9EQC1 369 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Gm11983V9GXS8 105 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Arid4aF8VPQ2 1261 aaKnown RBP20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 RargP18911 458 aaKnown RBP20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 HrQ61645 1182 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Cd274Q9EP73 290 aa20.55■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Eif6O55135 245 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Vps33bP59016 617 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Cdr2P97817 455 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Krt222Q8CCX5 294 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ccdc73Q8CDM4 1066 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 ToporslQ9D2F8 683 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Arl6ip4Q9JM93 229 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 ThegQ9JMB1 375 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Klrc1Q9Z202 244 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Kif3cO35066 796 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Tsr1Q5SWD9 803 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Kcnj11Q61743 390 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Mindy1Q76LS9 468 aa20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Leng8Q8CBY3 785 aaKnown RBP20.54■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ssrp1Q08943 708 aaKnown RBP20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Eif3j1Q3UGC7 261 aaKnown RBP20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Mcm7Q61881 719 aaKnown RBP20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Eif3j2Q66JS6 263 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Zbtb39Q6PDK0 712 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Igdcc3Q8BQC3 813 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 GlyctkQ8QZY2 523 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Stap2Q8R0L1 411 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Alpk1Q9CXB8 1231 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Aknad1E9Q8N6 675 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 DnttP09838 530 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Nf2P46662 596 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Gja3Q64448 417 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Grm4Q68EF4 912 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 NkrfQ8BY02 690 aaKnown RBP20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 AdpgkQ8VDL4 496 aa20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Togaram1Q6A070 1776 aaKnown RBP20.53■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Capza3P70190 299 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Top1Q04750 767 aaKnown RBP20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Zfp781Q0P5U5 243 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Lrriq3Q14DL3 633 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Arglu1Q3UL36 271 aaKnown RBP20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Sec31aQ3UPL0 1230 aaKnown RBP20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ezh2Q61188 746 aaKnown RBP20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ddx3yQ62095 658 aaKnown RBP20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Fhod1Q6P9Q4 1197 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Pip5kl1Q6U7H8 395 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Ankrd13aQ80UP5 588 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Cracr2bQ80ZJ8 394 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Bpifb6Q8BU51 449 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Lrrc41Q8K1C9 807 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 HyiQ8R1F5 277 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Sar1bQ9CQC9 198 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Plcb1Q9Z1B3 1216 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 GnaqP21279 359 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Tal1P22091 329 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Stim1P70302 685 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Psg29Q3URN6 468 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Bbs9Q811G0 885 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Hps4Q99KG7 671 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Kremen1Q99N43 473 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 Fsip1Q9D3V5 435 aa20.52■□□□□ 0.88
Ccdc3-201ENSMUST00000027988 AgtP11859 477 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Ppp4cP97470 307 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Spg7Q3ULF4 781 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Papd7Q6PB75 542 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Rab11fip4Q8BQP8 635 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Vmn1r218Q8R261 298 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Ppp1r3gQ9CW07 347 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 RabggtaQ9JHK4 567 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Fkbp3Q62446 224 aaKnown RBP20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Kif2bQ8C0N1 668 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Trmt112Q9DCG9 125 aa20.51■□□□□ 0.87
Ccdc3-201ENSMUST00000027988 Klra17Q9JMA4 273 aa20.51■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms