RNA–Protein interactions for RNA: ENSMUST00000021043.4

Ccl1-201, Transcript of C-C motif chemokine 1, mousemouse

TSL 1 (best) BASIC

Gene Ccl1, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-201ENSMUST00000021043 Ppp1r10Q80W00 888 aaKnown RBP13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cyp26b1Q811W2 512 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 EngaseQ8BX80 734 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 PdgfcQ8CI19 345 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Alg3Q8K2A8 438 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cchcr1Q8K2I2 770 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Plcd3Q8K2J0 785 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Gprc5cQ8K3J9 440 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Rufy3Q9D394 469 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Xrn2Q9DBR1 951 aaKnown RBP13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Fkbp1bQ9Z2I2 108 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Psmd10Q9Z2X2 231 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Myh8P13542 1937 aa13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Lama2Q60675 3118 aaKnown RBP13.68□□□□□ -0.22
Ccl1-201ENSMUST00000021043 JcadQ5DTX6 1320 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Pabpc1lA2A5N3 607 aaKnown RBP13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 NfkbieO54910 364 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Esyt1Q3U7R1 1092 aaKnown RBP13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Gm1587Q3UT80 123 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Utp18Q5SSI6 552 aaKnown RBP13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Hoxa13Q62424 386 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Nxf7Q80SZ6 620 aaKnown RBP13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 U2af1l4Q8BGJ9 220 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cdkn2aipQ8BI72 563 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Ranbp6Q8BIV3 1105 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Gjc2Q8BQU6 440 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Yars2Q8BYL4 472 aaKnown RBP13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Pof1bQ8K4L4 587 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Rufy2Q8R4C2 606 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Dnajb2Q9QYI5 324 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Sel1lQ9Z2G6 790 aa13.67□□□□□ -0.22
Ccl1-201ENSMUST00000021043 AW822073A0A0N4SUK1 652 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Gm44511A0A0N4SW10 223 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Zbtb21E9Q444 1094 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Prom1O54990 867 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Klrb1bP27812 223 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Stat1P42225 749 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Foxp1P58462 705 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cplx2P84086 134 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Brd9Q3UQU0 596 aaKnown RBP13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cln3Q61124 438 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Foxd1Q61345 456 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Eif3j2Q66JS6 263 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Zcchc18Q8VD24 393 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Lrrc2Q8VDB8 371 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Prpf3Q922U1 683 aaKnown RBP13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Adgrf4Q9D2L6 698 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Eif4enif1Q9EST3 983 aaKnown RBP13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Rcan1Q9JHG6 198 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 AllcQ9JHX6 414 aa13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 SktA2AQ25 1946 aaKnown RBP13.66□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cntnap2Q9CPW0 1332 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Btnl4A2CG29 586 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Zscan20B2KFW1 1030 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Gm20425E9Q035 978 aaKnown RBP13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Phldb3E9QAF4 648 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Slc6a20bO88575 635 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 SrprbP47758 269 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 PtpreP49446 699 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Mcph1Q7TT79 822 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Tdp1Q8BJ37 609 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 RadxQ8C779 850 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Dcaf8Q8N7N5 591 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Iffo2Q8R2V2 512 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Kdm8Q9CXT6 414 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Cul5Q9D5V5 780 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Tbx20Q9ES03 445 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Nlrp5Q9R1M5 1163 aa13.65□□□□□ -0.22
Ccl1-201ENSMUST00000021043 Rnf19bA2A7Q9 732 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Fyb2A2A995 729 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Pfkfb3A7UAK5 555 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Vwa3bJ9JI28 736 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Lnx1O70263 728 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Fzd1O70421 642 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 MycP01108 439 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Aco1P28271 889 aaKnown RBP13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Sept4P28661 478 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Irs1P35569 1233 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 SqleP52019 572 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Ctdnep1Q3TP92 244 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Cyp2c29Q64458 490 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Prmt6Q6NZB1 378 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Smarcc2Q6PDG5 1213 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Casc1Q6TDU8 730 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Ube2q1Q7TSS2 422 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Pramel7Q810Y8 479 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Zswim3Q8CFL8 695 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Acat1Q8QZT1 424 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Fubp1Q91WJ8 651 aaKnown RBP13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 TbcbQ9D1E6 244 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Map3k20Q9ESL4 802 aaKnown RBP13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Maged1Q9QYH6 775 aaKnown RBP13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Ubxn8Q9QZ49 277 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Stk39Q9Z1W9 556 aa13.64□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Gm10093D3YYI8 482 aa13.63□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Gcnt4E9Q649 455 aa13.63□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Hdac1O09106 482 aaKnown RBP13.63□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Pitpnm1O35954 1243 aa13.63□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Gja8P28236 440 aa13.63□□□□□ -0.23
Ccl1-201ENSMUST00000021043 Nedd1P33215 660 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms