RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cep85Q8BMK0 761 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Med7Q9CZB6 233 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Q9DAQ4 598 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ttc41Q692V3 1318 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm15262A0A140LIQ5 728 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Traf5P70191 558 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mettl17Q3U2U7 461 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nxf2Q4ZGD8 691 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Znf697Q569E7 569 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Krt32Q62168 407 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Bend3Q6PAL0 825 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Klhl29Q80T74 875 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Serpinb10Q8K1K6 397 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 1700020D05RikQ99PB1 294 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dbn1Q9QXS6 706 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lmtk2Q3TYD6 1471 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tex13c2A0A0G2JGA3 530 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ano3A2AHL1 981 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm4340L7N2C4 268 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gna15P30678 374 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Eif4a1P60843 406 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Tmed1Q3V009 227 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gngt2Q61017 69 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Kcnj14Q8JZN3 434 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Stx19Q8R1Q0 292 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Trmt44Q9D2Q2 713 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 PdclQ9DBX2 301 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Tfcp2Q9ERA0 502 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Igsf1Q7TQA1 1317 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 NxnP97346 435 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dab2P98078 766 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Arhgef1Q61210 920 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zbtb40Q6PCS8 1258 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pak4Q8BTW9 593 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Atg16l1Q8C0J2 607 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Spats2lQ91WJ7 558 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 NonoQ99K48 473 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 HibadhQ99L13 335 aaKnown RBP9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 MlklQ9D2Y4 472 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 FliiQ9JJ28 1271 aa9.96□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Mug2P28666 1451 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cyp26a1O55127 497 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Aoc3O70423 765 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sycp3P70281 254 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Lig3P97386 1015 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cdcp1Q5U462 833 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Wdr24Q8CFJ9 790 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Spata4Q8K3V1 295 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zcchc18Q8VD24 393 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Erp44Q9D1Q6 406 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pck1Q9Z2V4 622 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Prrc2bQ7TPM1 1486 aaKnown RBP9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Lrrc7Q80TE7 1490 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Msh6P54276 1358 aaKnown RBP9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Anks1bQ8BIZ1 1259 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Me3Q8BMF3 604 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dnaaf2Q8BPI1 814 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Abhd8Q8R0P8 439 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc12a6Q924N4 1150 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nlgn1Q99K10 843 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cttnbp2nlQ99LJ0 638 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 BlvraQ9CY64 295 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Prpsap1Q9D0M1 356 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ecel1Q9JMI0 775 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Idh1O88844 414 aaKnown RBP9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Hspd1P63038 573 aaKnown RBP9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Asap3Q5U464 904 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Actn1Q7TPR4 892 aaKnown RBP9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ipo11Q8K2V6 975 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 CenpkQ9ESN5 271 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rcan1Q9JHG6 198 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc12a7Q9WVL3 1083 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc8a3S4R2P9 928 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm43738A0A0G2JEA5 862 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pde6aP27664 859 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Foxp2P58463 714 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Kiaa1468Q148V7 1216 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Q3TTJ4 293 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Prmt9Q3U3W5 846 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rsad1Q5SUV1 442 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 L3mbtl3Q8BLB7 883 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dnajc5bQ9CQ94 199 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 IdeQ9JHR7 1019 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sorbs3Q9R1Z8 733 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Col17a1Q07563 1470 aa9.95□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cfap221A9Q751 836 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Lrrc23O35125 340 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pank2Q3U4S0 443 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nr1d1Q3UV55 615 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 PapolaQ61183 739 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ccdc40Q8BI79 1192 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Bag5Q8CI32 447 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Llcfc1Q9D9P8 108 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Abcc12Q80WJ6 1366 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Stox1B2RQL2 990 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Vwa3bJ9JI28 736 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 YwhagP61982 247 aaKnown RBP9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 MtbpQ8BJS8 894 aaKnown RBP9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cog5Q8C0L8 829 aa9.94□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cxcl11Q9JHH5 100 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms