RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 CFT2Q12102 859 aaPredicted RBP0.09□□□□□ -2.4
snR50snR50 VAS1P07806 1104 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 SAG1P20840 650 aa0.08□□□□□ -2.4
snR50snR50 RFA2P26754 273 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 FRD1P32614 470 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 SER1P33330 395 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 KTR3P38130 404 aaPredicted RBP0.08□□□□□ -2.4
snR50snR50 OSH3P38713 996 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 ECM10P39987 644 aa0.08□□□□□ -2.4
snR50snR50 EAF5P39995 279 aa0.08□□□□□ -2.4
snR50snR50 CTF18P49956 741 aa0.08□□□□□ -2.4
snR50snR50 NBP1P52919 319 aaPredicted RBP0.08□□□□□ -2.4
snR50snR50 RPN14P53196 417 aa0.08□□□□□ -2.4
snR50snR50 IBD2P53892 351 aa0.08□□□□□ -2.4
snR50snR50 INN1P53901 409 aa0.08□□□□□ -2.4
snR50snR50 RHO4Q00246 291 aa0.08□□□□□ -2.4
snR50snR50 YVH1Q02256 364 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 YPL014WQ02606 381 aa0.08□□□□□ -2.4
snR50snR50 RLI1Q03195 608 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 HER2Q03557 464 aa0.08□□□□□ -2.4
snR50snR50 GLO2Q05584 274 aa0.08□□□□□ -2.4
snR50snR50 ADE13Q05911 482 aaKnown RBP0.08□□□□□ -2.4
snR50snR50 MRPL51Q06090 140 aaPredicted RBP0.08□□□□□ -2.4
snR50snR50 DIC1Q06143 298 aa0.08□□□□□ -2.4
snR50snR50 SWA2Q06677 668 aa0.08□□□□□ -2.4
snR50snR50 CWC2Q12046 339 aaPredicted RBP0.08□□□□□ -2.4
snR50snR50 PSF3Q12146 194 aa0.08□□□□□ -2.4
snR50snR50 YLR108CQ12259 485 aa0.08□□□□□ -2.4
snR50snR50 RAX2Q12465 1220 aa0.08□□□□□ -2.4
snR50snR50 PSK1P31374 1356 aa0.07□□□□□ -2.4
snR50snR50 SNF3P10870 884 aa0.07□□□□□ -2.4
snR50snR50 APE1P14904 514 aa0.07□□□□□ -2.4
snR50snR50 YCR007CP25354 239 aa0.07□□□□□ -2.4
snR50snR50 TPS2P31688 896 aaKnown RBP0.07□□□□□ -2.4
snR50snR50 CYM1P32898 989 aa0.07□□□□□ -2.4
snR50snR50 NTR2P36118 322 aaPredicted RBP0.07□□□□□ -2.4
snR50snR50 GEX2P36173 615 aa0.07□□□□□ -2.4
snR50snR50 UTP18P40362 594 aaPredicted RBP0.07□□□□□ -2.4
snR50snR50 PKP1P40530 394 aa0.07□□□□□ -2.4
snR50snR50 DLD2P46681 530 aaKnown RBP0.07□□□□□ -2.4
snR50snR50 ALT2P52892 507 aa0.07□□□□□ -2.4
snR50snR50 IST1P53843 298 aaPredicted RBP0.07□□□□□ -2.4
snR50snR50 ECM38Q05902 660 aaPredicted RBP0.07□□□□□ -2.4
snR50snR50 SDH5Q08230 162 aa0.07□□□□□ -2.4
snR50snR50 HRT1Q08273 121 aa0.07□□□□□ -2.4
snR50snR50 YPR027CQ12079 277 aa0.07□□□□□ -2.4
snR50snR50 NKP1Q12493 238 aa0.07□□□□□ -2.4
snR50snR50 CBP6P07253 162 aaPredicted RBP0.06□□□□□ -2.4
snR50snR50 CHS1P08004 1131 aa0.06□□□□□ -2.4
snR50snR50 NAM2P11325 894 aa0.06□□□□□ -2.4
snR50snR50 PGS1P25578 521 aa0.06□□□□□ -2.4
snR50snR50 ARP2P32381 391 aaKnown RBP0.06□□□□□ -2.4
snR50snR50 DPH2P32461 534 aa0.06□□□□□ -2.4
snR50snR50 ELO1P39540 310 aa0.06□□□□□ -2.4
snR50snR50 GPP2P40106 250 aaKnown RBP0.06□□□□□ -2.4
snR50snR50 RIC1P40395 1056 aa0.06□□□□□ -2.4
snR50snR50 DUG1P43616 481 aaKnown RBP0.06□□□□□ -2.4
snR50snR50 PMT3P47190 753 aa0.06□□□□□ -2.4
snR50snR50 BRO1P48582 844 aa0.06□□□□□ -2.4
snR50snR50 YGR237CP50089 785 aa0.06□□□□□ -2.4
snR50snR50 ATP22P50273 684 aaPredicted RBP0.06□□□□□ -2.4
snR50snR50 PYK2P52489 506 aaKnown RBP0.06□□□□□ -2.4
snR50snR50 CRH1P53301 507 aa0.06□□□□□ -2.4
snR50snR50 MKC7P53379 596 aa0.06□□□□□ -2.4
snR50snR50 RSM28Q03430 361 aa0.06□□□□□ -2.4
snR50snR50 YMR160WQ03823 816 aa0.06□□□□□ -2.4
snR50snR50 IRC25Q07951 179 aa0.06□□□□□ -2.4
snR50snR50 YOL057WQ08225 711 aa0.06□□□□□ -2.4
snR50snR50 THP3Q12049 470 aaKnown RBP0.06□□□□□ -2.4
snR50snR50 RRD2Q12461 358 aa0.06□□□□□ -2.4
snR50snR50 ADE3P07245 946 aaKnown RBP0.05□□□□□ -2.4
snR50snR50 PUT2P07275 575 aa0.05□□□□□ -2.4
snR50snR50 RPL8AP17076 256 aaKnown RBP0.05□□□□□ -2.4
snR50snR50 EXO70P19658 623 aa0.05□□□□□ -2.4
snR50snR50 TGL1P34163 548 aa0.05□□□□□ -2.4
snR50snR50 STB6P36085 766 aa0.05□□□□□ -2.4
snR50snR50 NAT2P37293 288 aa0.05□□□□□ -2.4
snR50snR50 MIX23P38162 196 aa0.05□□□□□ -2.4
snR50snR50 MSG5P38590 489 aa0.05□□□□□ -2.4
snR50snR50 PRM5P40476 318 aa0.05□□□□□ -2.4
snR50snR50 DFG10P40526 253 aa0.05□□□□□ -2.4
snR50snR50 NNF1P47149 201 aa0.05□□□□□ -2.4
snR50snR50 ZDS2P54786 942 aa0.05□□□□□ -2.4
snR50snR50 IRC15Q02733 499 aa0.05□□□□□ -2.4
snR50snR50 CRN1Q06440 651 aa0.05□□□□□ -2.4
snR50snR50 YPR195CQ06594 109 aa0.05□□□□□ -2.4
snR50snR50 YDL057WQ07379 328 aa0.05□□□□□ -2.4
snR50snR50 ETT1Q08421 412 aaKnown RBP0.05□□□□□ -2.4
snR50snR50 APL4Q12028 832 aa0.05□□□□□ -2.4
snR50snR50 ICL2Q12031 575 aa0.05□□□□□ -2.4
snR50snR50 SWT1Q12104 458 aa0.05□□□□□ -2.4
snR50snR50 LSP1Q12230 341 aaKnown RBP0.05□□□□□ -2.4
snR50snR50 RMP1Q12530 201 aa0.05□□□□□ -2.4
snR50snR50 CCH1P50077 2039 aa0.04□□□□□ -2.4
snR50snR50 PET122P10355 254 aa0.04□□□□□ -2.4
snR50snR50 SPO16P17122 198 aa0.04□□□□□ -2.4
snR50snR50 CRM1P30822 1084 aaKnown RBP0.04□□□□□ -2.4
snR50snR50 YKL050CP35736 922 aa0.04□□□□□ -2.4
snR50snR50 SDS22P36047 338 aa0.04□□□□□ -2.4
snR50snR50 ESL2P36168 1195 aa0.04□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms