RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	IDS2	P46958	469 aa		4.92	□□□□□ -1.62
snR19	snR19	RPS7B	P48164	190 aa	Known RBP	4.92	□□□□□ -1.62
snR19	snR19	ESBP6	P53918	673 aa		4.92	□□□□□ -1.62
snR19	snR19	MOT3	P54785	490 aa	Known RBP	4.92	□□□□□ -1.62
snR19	snR19	VPS20	Q04272	221 aa		4.92	□□□□□ -1.62
snR19	snR19	RRN11	Q04712	507 aa		4.92	□□□□□ -1.62
snR19	snR19	MMR1	Q06324	491 aa		4.92	□□□□□ -1.62
snR19	snR19	RKM1	Q08961	583 aa	Predicted RBP	4.92	□□□□□ -1.62
snR19	snR19	AAC1	P04710	309 aa		4.91	□□□□□ -1.62
snR19	snR19	SSC1	P0CS90	654 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	YPK1	P12688	680 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	PMA2	P19657	947 aa		4.91	□□□□□ -1.62
snR19	snR19	TYR1	P20049	452 aa		4.91	□□□□□ -1.62
snR19	snR19	RPB4	P20433	221 aa	Predicted RBP	4.91	□□□□□ -1.62
snR19	snR19	RNR3	P21672	869 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	OPI1	P21957	404 aa		4.91	□□□□□ -1.62
snR19	snR19	ITR2	P30606	609 aa		4.91	□□□□□ -1.62
snR19	snR19	PRE2	P30656	287 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	PDB1	P32473	366 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	RAD5	P32849	1169 aa	Predicted RBP	4.91	□□□□□ -1.62
snR19	snR19	RPC34	P32910	317 aa		4.91	□□□□□ -1.62
snR19	snR19	MFT1	P33441	392 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	PTH2	P34222	208 aa		4.91	□□□□□ -1.62
snR19	snR19	FLO10	P36170	1169 aa		4.91	□□□□□ -1.62
snR19	snR19	APM3	P38153	483 aa		4.91	□□□□□ -1.62
snR19	snR19	YBR242W	P38331	238 aa		4.91	□□□□□ -1.62
snR19	snR19	CAJ1	P39101	391 aa		4.91	□□□□□ -1.62
snR19	snR19	STB1	P42845	420 aa		4.91	□□□□□ -1.62
snR19	snR19	SAD1	P43589	448 aa		4.91	□□□□□ -1.62
snR19	snR19	SNX4	P47057	423 aa		4.91	□□□□□ -1.62
snR19	snR19	YGL242C	P53066	181 aa		4.91	□□□□□ -1.62
snR19	snR19	GFD1	Q04839	188 aa	Known RBP	4.91	□□□□□ -1.62
snR19	snR19	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
snR19	snR19	REP1	P03871	373 aa		4.9	□□□□□ -1.63
snR19	snR19	RPL7A	P05737	244 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	GCD2	P12754	651 aa	Predicted RBP	4.9	□□□□□ -1.63
snR19	snR19	SNA3	P14359	133 aa		4.9	□□□□□ -1.63
snR19	snR19	VPS1	P21576	704 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	PRO3	P32263	286 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	SSO1	P32867	290 aa		4.9	□□□□□ -1.63
snR19	snR19	MRPL40	P36534	297 aa		4.9	□□□□□ -1.63
snR19	snR19	UTP18	P40362	594 aa	Predicted RBP	4.9	□□□□□ -1.63
snR19	snR19	YIL001W	P40560	513 aa		4.9	□□□□□ -1.63
snR19	snR19	OPT1	P40897	799 aa		4.9	□□□□□ -1.63
snR19	snR19	MAL13	P53338	473 aa		4.9	□□□□□ -1.63
snR19	snR19	UBX4	P54730	416 aa		4.9	□□□□□ -1.63
snR19	snR19	PLP1	Q04004	230 aa		4.9	□□□□□ -1.63
snR19	snR19	YLH47	Q06493	454 aa		4.9	□□□□□ -1.63
snR19	snR19	RPL7B	Q12213	244 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	LSO2	Q3E772	92 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	ACC1	Q00955	2233 aa	Known RBP	4.9	□□□□□ -1.63
snR19	snR19	SIR1	P21691	654 aa		4.89	□□□□□ -1.63
snR19	snR19	MBR1	P23493	339 aa		4.89	□□□□□ -1.63
snR19	snR19	AAD3	P25612	363 aa		4.89	□□□□□ -1.63
snR19	snR19	YCR061W	P25639	631 aa		4.89	□□□□□ -1.63
snR19	snR19	SYN8	P31377	255 aa		4.89	□□□□□ -1.63
snR19	snR19	IFA38	P38286	347 aa		4.89	□□□□□ -1.63
snR19	snR19	ALD5	P40047	520 aa	Known RBP	4.89	□□□□□ -1.63
snR19	snR19	GPD2	P41911	440 aa	Known RBP	4.89	□□□□□ -1.63
snR19	snR19	IRC8	P47046	822 aa		4.89	□□□□□ -1.63
snR19	snR19	CAF130	P53280	1122 aa	Predicted RBP	4.89	□□□□□ -1.63
snR19	snR19	YKR005C	Q02203	525 aa		4.89	□□□□□ -1.63
snR19	snR19	DML1	Q03652	475 aa		4.89	□□□□□ -1.63
snR19	snR19	YKU80	Q04437	629 aa		4.89	□□□□□ -1.63
snR19	snR19	RTC5	Q12108	567 aa	Known RBP	4.89	□□□□□ -1.63
snR19	snR19	HTZ1	Q12692	134 aa	Known RBP	4.89	□□□□□ -1.63
snR19	snR19	RIF1	P29539	1916 aa		4.89	□□□□□ -1.63
snR19	snR19	CHO2	P05374	869 aa	Known RBP	4.88	□□□□□ -1.63
snR19	snR19	RPS3	P05750	240 aa	Known RBP	4.88	□□□□□ -1.63
snR19	snR19	HIS3	P06633	220 aa		4.88	□□□□□ -1.63
snR19	snR19	YMR085W	P0CF18	432 aa		4.88	□□□□□ -1.63
snR19	snR19	BIK1	P11709	440 aa		4.88	□□□□□ -1.63
snR19	snR19	PGI1	P12709	554 aa	Known RBP	4.88	□□□□□ -1.63
snR19	snR19	MER1	P16523	270 aa		4.88	□□□□□ -1.63
snR19	snR19	DPB3	P27344	201 aa		4.88	□□□□□ -1.63
snR19	snR19	YKL097C	P34245	136 aa		4.88	□□□□□ -1.63
snR19	snR19	SAP185	P40856	1058 aa		4.88	□□□□□ -1.63
snR19	snR19	PHB1	P40961	287 aa		4.88	□□□□□ -1.63
snR19	snR19	YFL015C	P43578	164 aa		4.88	□□□□□ -1.63
snR19	snR19	RBL2	P48606	106 aa	Known RBP	4.88	□□□□□ -1.63
snR19	snR19	YNL092W	P53934	400 aa		4.88	□□□□□ -1.63
snR19	snR19	WAR1	Q03631	944 aa		4.88	□□□□□ -1.63
snR19	snR19	NNT1	Q05874	261 aa		4.88	□□□□□ -1.63
snR19	snR19	AIM6	Q07716	390 aa		4.88	□□□□□ -1.63
snR19	snR19	CRT10	Q08226	957 aa		4.88	□□□□□ -1.63
snR19	snR19	SCM3	Q12334	223 aa		4.88	□□□□□ -1.63
snR19	snR19	RAD61	Q99359	647 aa		4.88	□□□□□ -1.63
snR19	snR19	PGK1	P00560	416 aa	Known RBP	4.87	□□□□□ -1.63
snR19	snR19	RPS19A	P07280	144 aa	Known RBP	4.87	□□□□□ -1.63
snR19	snR19	RPS19B	P07281	144 aa	Predicted RBP	4.87	□□□□□ -1.63
snR19	snR19	POL3	P15436	1097 aa		4.87	□□□□□ -1.63
snR19	snR19	PHO81	P17442	1178 aa		4.87	□□□□□ -1.63
snR19	snR19	RPO26	P20435	155 aa		4.87	□□□□□ -1.63
snR19	snR19	MCM3	P24279	971 aa	Known RBP	4.87	□□□□□ -1.63
snR19	snR19	MRPL9	P31334	269 aa		4.87	□□□□□ -1.63
snR19	snR19	YEL043W	P32618	956 aa		4.87	□□□□□ -1.63
snR19	snR19	RIB7	P33312	244 aa		4.87	□□□□□ -1.63
snR19	snR19	CUE2	P36075	443 aa	Known RBP	4.87	□□□□□ -1.63
snR19	snR19	APD1	P38281	316 aa		4.87	□□□□□ -1.63
snR19	snR19	IMD4	P50094	524 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms