RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C ERG26P53199 349 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C YNL181WP53878 407 aa3.64□□□□□ -1.83
CUP9YPL177C EFM6P53970 246 aa3.64□□□□□ -1.83
CUP9YPL177C RSM23Q01163 450 aa3.64□□□□□ -1.83
CUP9YPL177C NUP100Q02629 959 aa3.64□□□□□ -1.83
CUP9YPL177C LUC7Q07508 261 aaPredicted RBP3.64□□□□□ -1.83
CUP9YPL177C APL5Q08951 932 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C NOP58Q12499 511 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C ARG81P05085 880 aa3.63□□□□□ -1.83
CUP9YPL177C PUT2P07275 575 aa3.63□□□□□ -1.83
CUP9YPL177C PUP3P25451 205 aaKnown RBP3.63□□□□□ -1.83
CUP9YPL177C UBA4P38820 440 aa3.63□□□□□ -1.83
CUP9YPL177C FLC2P39719 783 aa3.63□□□□□ -1.83
CUP9YPL177C YIL169CP40442 995 aa3.63□□□□□ -1.83
CUP9YPL177C RTS2P40962 232 aa3.63□□□□□ -1.83
CUP9YPL177C PTR3P43606 678 aa3.63□□□□□ -1.83
CUP9YPL177C MRX6P48564 524 aa3.63□□□□□ -1.83
CUP9YPL177C SOL4P53315 255 aa3.63□□□□□ -1.83
CUP9YPL177C YMR254CQ04838 102 aa3.63□□□□□ -1.83
CUP9YPL177C NMD4Q12129 218 aa3.63□□□□□ -1.83
CUP9YPL177C BSC1Q12140 328 aa3.63□□□□□ -1.83
CUP9YPL177C MF(ALPHA)1P01149 165 aa3.62□□□□□ -1.83
CUP9YPL177C MET8P15807 274 aa3.62□□□□□ -1.83
CUP9YPL177C EST1P17214 699 aaPredicted RBP3.62□□□□□ -1.83
CUP9YPL177C OLE1P21147 510 aaKnown RBP3.62□□□□□ -1.83
CUP9YPL177C SGF29P25554 259 aa3.62□□□□□ -1.83
CUP9YPL177C IMG1P25626 169 aa3.62□□□□□ -1.83
CUP9YPL177C SSE2P32590 693 aaKnown RBP3.62□□□□□ -1.83
CUP9YPL177C MTR2P34232 184 aaKnown RBP3.62□□□□□ -1.83
CUP9YPL177C ROT2P38138 954 aa3.62□□□□□ -1.83
CUP9YPL177C EFM2P38347 419 aa3.62□□□□□ -1.83
CUP9YPL177C RTT107P38850 1070 aa3.62□□□□□ -1.83
CUP9YPL177C CCT6P39079 546 aa3.62□□□□□ -1.83
CUP9YPL177C FET5P43561 622 aa3.62□□□□□ -1.83
CUP9YPL177C PYK2P52489 506 aaKnown RBP3.62□□□□□ -1.83
CUP9YPL177C YGL260WP53056 76 aa3.62□□□□□ -1.83
CUP9YPL177C RPC11Q04307 110 aaPredicted RBP3.62□□□□□ -1.83
CUP9YPL177C RRI2Q12348 645 aa3.62□□□□□ -1.83
CUP9YPL177C MRP13P12686 339 aa3.61□□□□□ -1.83
CUP9YPL177C HNM1P19807 563 aa3.61□□□□□ -1.83
CUP9YPL177C GID7P25569 745 aa3.61□□□□□ -1.83
CUP9YPL177C PEP3P27801 918 aa3.61□□□□□ -1.83
CUP9YPL177C IMP2'P32351 346 aa3.61□□□□□ -1.83
CUP9YPL177C TIF3P34167 436 aaKnown RBP3.61□□□□□ -1.83
CUP9YPL177C YBR144CP34215 104 aa3.61□□□□□ -1.83
CUP9YPL177C YBL055CP34220 418 aaPredicted RBP3.61□□□□□ -1.83
CUP9YPL177C NUP133P36161 1157 aa3.61□□□□□ -1.83
CUP9YPL177C ICS2P38284 255 aa3.61□□□□□ -1.83
CUP9YPL177C SGN1P40561 250 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
CUP9YPL177C IAH1P41734 238 aa3.61□□□□□ -1.83
CUP9YPL177C HOS2P53096 452 aaPredicted RBP3.61□□□□□ -1.83
CUP9YPL177C ARE2P53629 642 aaKnown RBP3.61□□□□□ -1.83
CUP9YPL177C MSC1Q03104 513 aa3.61□□□□□ -1.83
CUP9YPL177C YEH1Q07804 573 aa3.61□□□□□ -1.83
CUP9YPL177C CTI6Q08923 506 aa3.61□□□□□ -1.83
CUP9YPL177C MED1Q12321 566 aa3.61□□□□□ -1.83
CUP9YPL177C YPT6Q99260 215 aa3.61□□□□□ -1.83
CUP9YPL177C SGS1P35187 1447 aa3.61□□□□□ -1.83
CUP9YPL177C BUD5P25300 642 aaPredicted RBP3.6□□□□□ -1.83
CUP9YPL177C BOS1P25385 244 aa3.6□□□□□ -1.83
CUP9YPL177C MCM4P30665 933 aaKnown RBP3.6□□□□□ -1.83
CUP9YPL177C NOP4P37838 685 aaKnown RBP3.6□□□□□ -1.83
CUP9YPL177C RPL32P38061 130 aaKnown RBP3.6□□□□□ -1.83
CUP9YPL177C YBR225WP38321 900 aa3.6□□□□□ -1.83
CUP9YPL177C ERG7P38604 731 aa3.6□□□□□ -1.83
CUP9YPL177C YND1P40009 630 aa3.6□□□□□ -1.83
CUP9YPL177C RGI2P40188 164 aa3.6□□□□□ -1.83
CUP9YPL177C FAR3P46671 204 aa3.6□□□□□ -1.83
CUP9YPL177C APT1P49435 187 aaKnown RBP3.6□□□□□ -1.83
CUP9YPL177C YGR127WP53275 312 aa3.6□□□□□ -1.83
CUP9YPL177C IPI3P53877 555 aa3.6□□□□□ -1.83
CUP9YPL177C TIM10P87108 93 aa3.6□□□□□ -1.83
CUP9YPL177C YMR317WQ04893 1140 aa3.6□□□□□ -1.83
CUP9YPL177C FMP42Q04991 504 aa3.6□□□□□ -1.83
CUP9YPL177C RTT103Q05543 409 aa3.6□□□□□ -1.83
CUP9YPL177C IMH1Q06704 911 aaKnown RBP3.6□□□□□ -1.83
CUP9YPL177C FMP40Q08968 688 aaPredicted RBP3.6□□□□□ -1.83
CUP9YPL177C CBS1P14066 229 aa3.59□□□□□ -1.83
CUP9YPL177C RPS2P25443 254 aaKnown RBP3.59□□□□□ -1.83
CUP9YPL177C YOX1P34161 385 aa3.59□□□□□ -1.83
CUP9YPL177C YKL100CP34248 587 aa3.59□□□□□ -1.83
CUP9YPL177C SRO77P38163 1010 aa3.59□□□□□ -1.83
CUP9YPL177C REG2P38232 338 aa3.59□□□□□ -1.83
CUP9YPL177C NPR2P39923 615 aa3.59□□□□□ -1.83
CUP9YPL177C AZF1P41696 914 aa3.59□□□□□ -1.83
CUP9YPL177C SMM1P53720 384 aaKnown RBP3.59□□□□□ -1.83
CUP9YPL177C VPS75P53853 264 aa3.59□□□□□ -1.83
CUP9YPL177C DUG3P53871 357 aa3.59□□□□□ -1.83
CUP9YPL177C YDR415CQ04033 374 aaPredicted RBP3.59□□□□□ -1.83
CUP9YPL177C MFB1Q04922 465 aa3.59□□□□□ -1.83
CUP9YPL177C RSF1Q05043 376 aa3.59□□□□□ -1.83
CUP9YPL177C DIC1Q06143 298 aa3.59□□□□□ -1.83
CUP9YPL177C RCN2Q12044 265 aa3.59□□□□□ -1.83
CUP9YPL177C YMR230W-AQ3E7B5 62 aa3.59□□□□□ -1.83
CUP9YPL177C BAR1P12630 587 aa3.58□□□□□ -1.84
CUP9YPL177C SGV1P23293 657 aaKnown RBP3.58□□□□□ -1.84
CUP9YPL177C RAD24P32641 659 aa3.58□□□□□ -1.84
CUP9YPL177C PHD1P36093 366 aa3.58□□□□□ -1.84
CUP9YPL177C SDS24P38314 527 aa3.58□□□□□ -1.84
CUP9YPL177C SAD1P43589 448 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms