RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YLR413WQ06689 675 aa3.26□□□□□ -1.89
LCB4YOR171C YDL086WQ07505 273 aa3.26□□□□□ -1.89
LCB4YOR171C RKM1Q08961 583 aaPredicted RBP3.26□□□□□ -1.89
LCB4YOR171C GRX6Q12438 231 aa3.26□□□□□ -1.89
LCB4YOR171C CDC36P06100 191 aaPredicted RBP3.25□□□□□ -1.89
LCB4YOR171C SEC53P07283 254 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C VAS1P07806 1104 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C SUI3P09064 285 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C EST1P17214 699 aaPredicted RBP3.25□□□□□ -1.89
LCB4YOR171C OSM1P21375 501 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C TPO5P36029 618 aa3.25□□□□□ -1.89
LCB4YOR171C SDS22P36047 338 aa3.25□□□□□ -1.89
LCB4YOR171C ELF1P36053 145 aa3.25□□□□□ -1.89
LCB4YOR171C MRPL7P36519 292 aa3.25□□□□□ -1.89
LCB4YOR171C CBR1P38626 284 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C LRO1P40345 661 aa3.25□□□□□ -1.89
LCB4YOR171C NDC80P40460 691 aa3.25□□□□□ -1.89
LCB4YOR171C ALK1P43633 760 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C DLD2P46681 530 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C MRX6P48564 524 aa3.25□□□□□ -1.89
LCB4YOR171C TOM22P49334 152 aa3.25□□□□□ -1.89
LCB4YOR171C KTR6P54070 446 aa3.25□□□□□ -1.89
LCB4YOR171C SKG3Q06315 1026 aa3.25□□□□□ -1.89
LCB4YOR171C ARR3Q06598 404 aa3.25□□□□□ -1.89
LCB4YOR171C FMP45Q07651 309 aa3.25□□□□□ -1.89
LCB4YOR171C MCH5Q08777 521 aa3.25□□□□□ -1.89
LCB4YOR171C TCO89Q08921 799 aa3.25□□□□□ -1.89
LCB4YOR171C HUA2Q12134 243 aa3.25□□□□□ -1.89
LCB4YOR171C GET3Q12154 354 aaKnown RBP3.25□□□□□ -1.89
LCB4YOR171C ACF2Q12168 779 aa3.25□□□□□ -1.89
LCB4YOR171C LDB17Q12342 491 aa3.25□□□□□ -1.89
LCB4YOR171C RPL19AP0CX82 189 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C RPL19BP0CX83 189 aaPredicted RBP3.24□□□□□ -1.89
LCB4YOR171C DAP2P18962 818 aa3.24□□□□□ -1.89
LCB4YOR171C CLB4P24871 460 aa3.24□□□□□ -1.89
LCB4YOR171C SUA5P32579 426 aa3.24□□□□□ -1.89
LCB4YOR171C FRD1P32614 470 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C LIN1P38852 340 aaPredicted RBP3.24□□□□□ -1.89
LCB4YOR171C MSS2P40990 351 aa3.24□□□□□ -1.89
LCB4YOR171C SIP4P46954 829 aa3.24□□□□□ -1.89
LCB4YOR171C ALT2P52892 507 aa3.24□□□□□ -1.89
LCB4YOR171C CUE3P53137 624 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C DCP2P53550 970 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C PGA2P53903 129 aa3.24□□□□□ -1.89
LCB4YOR171C IVY1Q04934 453 aa3.24□□□□□ -1.89
LCB4YOR171C NDL1Q06568 189 aa3.24□□□□□ -1.89
LCB4YOR171C TLG2Q08144 397 aa3.24□□□□□ -1.89
LCB4YOR171C DSE3Q08729 430 aa3.24□□□□□ -1.89
LCB4YOR171C CTI6Q08923 506 aa3.24□□□□□ -1.89
LCB4YOR171C VIK1Q12045 647 aa3.24□□□□□ -1.89
LCB4YOR171C RKI1Q12189 258 aa3.24□□□□□ -1.89
LCB4YOR171C SKM1Q12469 655 aa3.24□□□□□ -1.89
LCB4YOR171C MRPL23Q12487 163 aaPredicted RBP3.24□□□□□ -1.89
LCB4YOR171C YML133CQ03099 1374 aa3.24□□□□□ -1.89
LCB4YOR171C YLL066CQ99208 1374 aa3.24□□□□□ -1.89
LCB4YOR171C RTC1Q08281 1341 aa3.24□□□□□ -1.89
LCB4YOR171C STE12P13574 688 aa3.24□□□□□ -1.89
LCB4YOR171C ABF1P14164 731 aa3.24□□□□□ -1.89
LCB4YOR171C CPR2P23285 205 aa3.24□□□□□ -1.89
LCB4YOR171C OCA4P25366 362 aa3.24□□□□□ -1.89
LCB4YOR171C PEP3P27801 918 aa3.24□□□□□ -1.89
LCB4YOR171C ERG1P32476 496 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C OAR1P35731 278 aa3.24□□□□□ -1.89
LCB4YOR171C YKR015CP36111 568 aa3.24□□□□□ -1.89
LCB4YOR171C MRPL37P36532 105 aa3.24□□□□□ -1.89
LCB4YOR171C MOH1P38191 138 aa3.24□□□□□ -1.89
LCB4YOR171C YHR054CP38780 354 aa3.24□□□□□ -1.89
LCB4YOR171C WSS1P38838 269 aa3.24□□□□□ -1.89
LCB4YOR171C RTR1P40084 226 aaPredicted RBP3.24□□□□□ -1.89
LCB4YOR171C ARG2P40360 574 aa3.24□□□□□ -1.89
LCB4YOR171C IAH1P41734 238 aa3.24□□□□□ -1.89
LCB4YOR171C NMA2P53204 395 aa3.24□□□□□ -1.89
LCB4YOR171C MPP6P53725 186 aaPredicted RBP3.24□□□□□ -1.89
LCB4YOR171C MRPL1Q04599 285 aa3.24□□□□□ -1.89
LCB4YOR171C FUS2Q05670 677 aa3.24□□□□□ -1.89
LCB4YOR171C HBT1Q07653 1046 aaKnown RBP3.24□□□□□ -1.89
LCB4YOR171C SWT1Q12104 458 aa3.24□□□□□ -1.89
LCB4YOR171C HOS1Q12214 470 aa3.24□□□□□ -1.89
LCB4YOR171C CMC2Q3E7A4 109 aa3.24□□□□□ -1.89
LCB4YOR171C LAG2Q92325 660 aa3.24□□□□□ -1.89
LCB4YOR171C PHO5P00635 467 aa3.23□□□□□ -1.89
LCB4YOR171C HXK2P04807 486 aaKnown RBP3.23□□□□□ -1.89
LCB4YOR171C ARO3P14843 370 aaKnown RBP3.23□□□□□ -1.89
LCB4YOR171C BET2P20133 325 aa3.23□□□□□ -1.89
LCB4YOR171C VPS33P20795 691 aa3.23□□□□□ -1.89
LCB4YOR171C CLB3P24870 427 aa3.23□□□□□ -1.89
LCB4YOR171C BUD5P25300 642 aaPredicted RBP3.23□□□□□ -1.89
LCB4YOR171C YCR051WP25631 222 aa3.23□□□□□ -1.89
LCB4YOR171C ERV1P27882 189 aa3.23□□□□□ -1.89
LCB4YOR171C CRM1P30822 1084 aaKnown RBP3.23□□□□□ -1.89
LCB4YOR171C NUP133P36161 1157 aa3.23□□□□□ -1.89
LCB4YOR171C SMF1P38925 575 aa3.23□□□□□ -1.89
LCB4YOR171C YTA12P40341 825 aa3.23□□□□□ -1.89
LCB4YOR171C PSP1P50896 841 aaKnown RBP3.23□□□□□ -1.89
LCB4YOR171C ACS1Q01574 713 aa3.23□□□□□ -1.89
LCB4YOR171C RSN1Q03516 953 aa3.23□□□□□ -1.89
LCB4YOR171C TRI1Q05024 226 aa3.23□□□□□ -1.89
LCB4YOR171C FMP40Q08968 688 aaPredicted RBP3.23□□□□□ -1.89
LCB4YOR171C SRN2Q99176 213 aa3.23□□□□□ -1.89
LCB4YOR171C ISN1Q99312 450 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms