RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT1	YNR001C	PKP1	P40530	394 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	COS12	P53053	380 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	VID30	P53076	958 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	TAM41	P53230	385 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	TOF1	P53840	1238 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	INN1	P53901	409 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	RPL6A	Q02326	176 aa	Known RBP	3.87	□□□□□ -1.79
CIT1	YNR001C	HMO1	Q03973	246 aa	Known RBP	3.87	□□□□□ -1.79
CIT1	YNR001C	RBA50	Q04418	439 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	DCI1	Q08558	271 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	FRE5	Q08908	694 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	CFT2	Q12102	859 aa	Predicted RBP	3.87	□□□□□ -1.79
CIT1	YNR001C	SGT2	Q12118	346 aa	Known RBP	3.87	□□□□□ -1.79
CIT1	YNR001C	CEX1	Q12453	761 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	TRM11	Q12463	433 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	SEC39	Q12745	709 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	YOR019W	Q99248	730 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	YPT6	Q99260	215 aa		3.87	□□□□□ -1.79
CIT1	YNR001C	TAO3	P40468	2376 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	RPO41	P13433	1351 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	PDR18	P53756	1333 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	RPS19A	P07280	144 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	RPS19B	P07281	144 aa	Predicted RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	PEX1	P24004	1043 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	GRR1	P24814	1151 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	YIH1	P25637	258 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	DAL80	P26343	269 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
CIT1	YNR001C	ERV1	P27882	189 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	URA7	P28274	579 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	DSS4	P32601	143 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	CMC1	P36064	111 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	GND1	P38720	489 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	RPP1	P38786	293 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	YHR097C	P38809	366 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	SPT8	P38915	602 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	VPS41	P38959	992 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	CAK1	P43568	368 aa	Predicted RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	CTR1	P49573	406 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	MNP1	P53163	194 aa	Predicted RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	YGR111W	P53265	400 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	MAL13	P53338	473 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	YNL144C	P53907	740 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	HEF3	P53978	1044 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	SPH1	Q06160	661 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	ATG23	Q06671	453 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	IRC10	Q08118	586 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	BUD7	Q08754	746 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	ACF2	Q12168	779 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	RPN5	Q12250	445 aa	Known RBP	3.86	□□□□□ -1.79
CIT1	YNR001C	MDY2	Q12285	212 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	AVL9	Q12500	764 aa		3.86	□□□□□ -1.79
CIT1	YNR001C	GAL80	P04387	435 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	SUP35	P05453	685 aa	Known RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	RAD3	P06839	778 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	LAT1	P12695	482 aa	Known RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	EST1	P17214	699 aa	Predicted RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	VPS34	P22543	875 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	VMA16	P23968	213 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	SYN8	P31377	255 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	RIB7	P33312	244 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	SIF2	P38262	535 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	GDT1	P38301	280 aa	Predicted RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	TMN3	P40071	706 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	PIG2	P40187	538 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	ELO3	P40319	345 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	GND2	P53319	492 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	TEX1	P53851	422 aa	Known RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	KAP120	Q02932	1032 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	GTB1	Q04924	702 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	RQC1	Q05468	723 aa	Known RBP	3.85	□□□□□ -1.79
CIT1	YNR001C	VTA1	Q06263	330 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	YFT2	Q06676	274 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	RTT109	Q07794	436 aa		3.85	□□□□□ -1.79
CIT1	YNR001C	RPL22A	P05749	121 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	RPL3	P14126	387 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	PDE1	P22434	369 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	ERG6	P25087	383 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	URK1	P27515	501 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	NTH1	P32356	751 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	SRB5	P32585	307 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	NIP100	P33420	868 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	PMT1	P33775	817 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	PRX1	P34227	261 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	SEF1	P34228	1148 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	HCS1	P34243	683 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	YKT6	P36015	200 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	YBR053C	P38235	358 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	LRO1	P40345	661 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	YIL089W	P40500	205 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	SEC27	P41811	889 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	FKH2	P41813	862 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	MAF1	P41910	395 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	DLD2	P46681	530 aa	Known RBP	3.84	□□□□□ -1.79
CIT1	YNR001C	ILM1	P47155	203 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	MUP1	P50276	574 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	TWF1	P53250	332 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	RIA1	P53893	1110 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	HOT1	Q03213	719 aa		3.84	□□□□□ -1.79
CIT1	YNR001C	ARG7	Q04728	441 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms